Job Description P32672 Confidence 6.14% Date Thu Jan 5 11:50:00 GMT 2012 Rank 17 Aligned Residues 228 % Identity 9% Template c2ht2B_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:h(+)/cl(-) exchange transporter clca; PDBTitle: structure of the escherichia coli clc chloride channel2 y445h mutant and fab complex Resolution 3.32 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																								.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.
Query Sequence		I	A	G	I	I	G	G	I	V	V	H	Y	L	K	K	I	P	V	H	K	V	L	R	S	V	M	P	I	F	I	I	P	I	V	G	T	L	I	T	A	G	I	M	M	W	G	L	G	E	P	V	G	A	L	.	.	.	.	.	T	N	S	L	T	Q	W	L	Q	G	M	Q	Q	G	S	I	V	M	L	A	V
Query Conservation																																																								.	.	.	.	.
Alig confidence																		.																																						.	.	.	.	.
Template Conservation																		.
Template Sequence		L	A	A	V	A	F	D	K	G	V	A	W	L	Q	N	Q	.	R	M	G	A	L	V	H	T	A	D	N	Y	P	L	L	L	T	V	A	F	L	C	S	A	V	L	A	M	F	G	Y	F	L	V	R	K	Y	A	P	E	A	G	G	S	G	I	P	E	I	E	G	A	L	E	D	Q	R	P	V	R	W	W	R
Template Known Secondary structure																		.								T		S																										T	T		G	G	G	S	S		S									T	T		S
Template Predicted Secondary structure																		.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	G	L	M	L	A	F	D	M	G	G	P	V	N	K	V	A	Y	A	F	M	L	I	C	V	A	Q	G	V	Y	T	V	V	A	I	A	A	V	G	I	C	I	P	P	L	G	M	G	L	A	T	L	I	G	R	K	N	F	S	A	E	E	R	E	T	G	K	A	A	L	V	M	G	C	V	G	V	T	E
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	K	F	F	G	G	L	G	T	L	G	G	G	M	V	L	G	R	E	G	P	T	V	Q	I	G	G	N	I	G	R	M	V	L	D	I	F	R	L	K	G	D	E	A	R	H	T	L	L	A	T	G	A	A	A	G	L	A	A	A	F	N
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T		S		B	S																			T	T			S																					T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.																.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		263	.	.	.	.	.	.											270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	I	P	F	A	A	.	.	.	.	.	.	.	.	.	.	A	D	P	L	R	V	I	P	S	I	M	V	G	S	V	C	G	A	V	T	A	A	L	V	G	A	Q	C	Y	A	G	W	G	G	L	I	V	L	P	V	V	E	G	K	L	G	Y	I	A	A	V	A	V	G	A	V	V	T	A	V	C	V	N
Query Conservation									.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	P	L	A	G	I	L	F	I	I	E	E	M	R	P	Q	F	R	Y	T	L	I	S	I	K	A	V	F	I	G	V	I	M	S	T	I	M	Y	R	I	F	N	H	E	V	A	L	I	D	V	G	K	L	S	D	A	P	L	N	T	L	W	L	Y	L	I	L	G	I	I	F	G	I	F	G	P	I	F	N	K
Template Known Secondary structure											T	T	T	T	S		S	S	S																									T	T			S											G	G	G
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	K	S	L	A	R	K	N	G	S	S	T	D	E	K	E	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	V	L	G	M	Q	D	L	L	H	R	V	H	G	G	N	I	T	K
Template Known Secondary structure													T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions