Return to main results Retrieve Phyre Job Id

Job DescriptionP11868
Confidence98.89%DateThu Jan 5 11:32:55 GMT 2012
Rank14Aligned Residues134
% Identity21%Templated2aa4a2
SCOP infoRibonuclease H-like motif Actin-like ATPase domain ROK
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210.........220.........230... ......240.........250.........260.........270...
Predicted Secondary structure 



















....















Query SS confidence 



































. . . .







































Query Sequence  GLVVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMM. . . . GTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGIS
Query Conservation    





 



 

  








 





 
....




 


  
  
      
  
    


 




 
Alig confidence 



































....















.....













.....
Template Conservation 
   
 

 


 


  
    
  
 


 

            
     
   .....
             .....
Template Sequence  DMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIA. . . . . SGRGIAAAAQGELA. . . . .
Template Known Secondary structure 
SSSTT

TTS



GGGSBS
TTS
B
TTS
BSB.....ST

GGGT.....
Template Predicted Secondary structure 




























.....





.....
Template SS confidence 















































































   123......130.........140.........150.........160.........170........ .180.........190..
 
   274.....280.........290.........300.........310.........320.........330.........340.....
Predicted Secondary structure 






















Query SS confidence 







































































Query Sequence  GLSSDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLIRRLVMEHLAVL
Query Conservation 
 
 
 
 
      

  
 

 
 
 


 
 


  
 
















  

  
   
  
Alig confidence  ..








































.













.












Template Conservation  ..      
      

  
   
      

  
 

   
 .
  




 
    .     
   
   
Template Sequence  . . GADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTD. CQCVVVGGSVGLAE. GYLALVETYLAQE
Template Known Secondary structure  ..T

TT

.
STST.TTTS
Template Predicted Secondary structure  ..






.







.
Template SS confidence 







































































   193......200.........210.........220.........230... ......240....... ..250.........260
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions