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Job DescriptionP11868
Confidence100.00%DateThu Jan 5 11:32:55 GMT 2012
Rank2Aligned Residues391
% Identity45%Templatec2iirJ_
PDB info PDB header:transferaseChain: J: PDB Molecule:acetate kinase; PDBTitle: acetate kinase from a hypothermophile thermotoga maritima
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40........ .50.........60.........70.......
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Query Sequence  PVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAFLSVN. . . GGEPAPLAHHSYEGALKAIAFELEKRNLN. . . .
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Template Sequence  MRVLVINSGSSSIKYQLIEMEGEKVLCKGIAERIGIEGSRLVHRVGDEKHVIERELPDHEEALKLILNTLVDEKLGVIKD
Template Known Secondary structure 
TTTTTT
TTSTT
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   78.80.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  . DSVALIGHRIAHGGSIFTESAIITDEVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYL
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Template Sequence  LKEIDAVGHRVVHGGERFKESVLVDEEVLKAIEEVSPLAPLHNPANLMGIKAAMKLLPGVPNVAVFDTAFHQTIPQKAYL
Template Known Secondary structure  STT

S

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GGGSTTTSTT

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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  YGLPWKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTR
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Template Sequence  YAIPYEYYEKYKIRRYGFHGTSHRYVSKRAAEILGKKLEELKIITCHIGNGASVAAVKYGKCVDTSMGFTPLEGLVMGTR
Template Known Secondary structure 
SS
T

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S
TTS
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SSTTSSS

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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   237..240.........250.........260.........270... ......280.........290.........300.........310.....
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Query Sequence  SGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGIS. GLSSDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASL
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Template Sequence  SGDLDPAIPFFIMEKEGISPQEMYDILNKKSGVYGLSKGFSSDMRDIEEAALKGDEWCKLVLEIYDYRIAKYIGAYAAAM
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TTT

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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   316...320.........330.........340.........350.........360.........370.........380.........390.....
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Query Sequence  RRLDGIIFTGGIGENSSLIRRLVMEHLAVLGLEIDTEMNNRSNSCGERIVSSENARVICAVIPTNEEKMIALDAIHLGKV
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Template Sequence  NGVDAIVFTAGVGENSPITREDVCSYLEFLGVKLDKQKNEETIRGKEGIISTPDSRVKVLVVPTNEELMIARDTKEIVEK
Template Known Secondary structure  T

STT
TTGGGT

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   321........330.........340.........350.........360.........370.........380.........390.........400
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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