Job Description P11868 Confidence 100.00% Date Thu Jan 5 11:32:55 GMT 2012 Rank 1 Aligned Residues 394 % Identity 83% Template c1x3nA_ PDB info PDB header:transferase Chain: A: PDB Molecule:propionate kinase; PDBTitle: crystal structure of amppnp bound propionate kinase (tdcd) from2 salmonella typhimurium Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	V	V	L	V	I	N	C	G	S	S	S	I	K	F	S	V	L	D	A	S	D	C	E	V	L	M	S	G	I	A	D	G	I	N	S	E	N	A	F	L	S	V	N	G	G	E	P	A	P	L	A	H	H	S	Y	E	G	A	L	K	A	I	A	F	E	L	E	K	R	N	L	N	D	S	V	A	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	P	V	V	L	V	I	N	C	G	S	S	S	I	K	F	S	V	L	D	V	A	T	C	D	V	L	M	A	G	I	A	D	G	M	N	T	E	N	A	F	L	S	I	N	G	D	K	P	I	N	L	A	H	S	N	Y	E	D	A	L	K	A	I	A	F	E	L	E	K	R	D	L	T	D	S	V	A	L	I
Template Known Secondary structure												S	S									T	T	T											S	T	T	S	S	S					S	T	T	S						S	S																T	T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	R	I	A	H	G	G	S	I	F	T	E	S	A	I	I	T	D	E	V	I	D	N	I	R	R	V	S	P	L	A	P	L	H	N	Y	A	N	L	S	G	I	E	S	A	Q	Q	L	F	P	G	V	T	Q	V	A	V	F	D	T	S	F	H	Q	T	M	A	P	E	A	Y	L	Y	G	L	P	W	K	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	H	R	I	A	H	G	G	E	L	F	T	Q	S	V	I	I	T	D	E	I	I	D	N	I	R	R	V	S	P	L	A	P	L	H	N	Y	A	N	L	S	G	I	D	A	A	R	H	L	F	P	A	V	R	Q	V	A	V	F	D	T	S	F	H	Q	T	L	A	P	E	A	Y	L	Y	G	L	P	W	E	Y
Template Known Secondary structure						S			T	T	T		S	S																G	G	G	S																			T	T	S							T	T	G	G	G	G	G									S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	E	L	G	V	R	R	Y	G	F	H	G	T	S	H	R	Y	V	S	Q	R	A	H	S	L	L	N	L	A	E	D	D	S	G	L	V	V	A	H	L	G	N	G	A	S	I	C	A	V	R	N	G	Q	S	V	D	T	S	M	G	M	T	P	L	E	G	L	M	M	G	T	R	S	G	D	V	D	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	S	L	G	V	R	R	Y	G	F	H	G	T	S	H	R	Y	V	S	R	R	A	Y	E	L	L	D	L	D	E	K	D	S	G	L	I	V	A	H	L	G	N	G	A	S	I	C	A	V	R	N	G	Q	S	V	D	T	S	M	G	M	T	P	L	E	G	L	M	M	G	T	R	S	G	D	V	D	F	G
Template Known Secondary structure				T	T							S																T	T		B	T	T	B									S	S	S								T	T						S			S	S	T	T	S	S	S			S	S				S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	S	W	V	A	S	Q	T	N	Q	S	L	G	D	L	E	R	V	V	N	K	E	S	G	L	L	G	I	S	G	L	S	S	D	L	R	V	L	E	K	A	W	H	E	G	H	E	R	A	Q	L	A	I	K	T	F	V	H	R	I	A	R	H	I	A	G	H	A	A	S	L	R	R	L	D	G	I	I	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	A	W	I	A	K	E	T	G	Q	T	L	S	D	L	E	R	V	V	N	K	E	S	G	L	L	G	I	S	G	L	S	S	D	L	R	V	L	E	K	A	W	H	E	G	H	E	R	A	R	L	A	I	K	T	F	V	H	R	I	A	R	H	I	A	G	H	A	A	S	L	H	R	L	D	G	I	I	F
Template Known Secondary structure											T													S								S	S		S											T	T																								T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	G	I	G	E	N	S	S	L	I	R	R	L	V	M	E	H	L	A	V	L	G	L	E	I	D	T	E	M	N	N	R	S	N	S	C	G	E	R	I	V	S	S	E	N	A	R	V	I	C	A	V	I	P	T	N	E	E	K	M	I	A	L	D	A	I	H	L	G	K	V	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	G	I	G	E	N	S	V	L	I	R	Q	L	V	I	E	H	L	G	V	L	G	L	T	L	D	V	E	M	N	K	Q	P	N	S	H	G	E	R	I	I	S	A	N	P	S	Q	V	I	C	A	V	I	P	T	N	E	E	K	M	I	A	L	D	A	I	H	L	G	N	V	K	A
Template Known Secondary structure																			T	T	G	G	G	T			B							S		G	G	G		S				B		T	T		S	S																					T	T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions