Job Description P0A7B1 Confidence 99.90% Date Thu Jan 5 11:05:15 GMT 2012 Rank 11 Aligned Residues 278 % Identity 17% Template c3hsiC_ PDB info PDB header:transferase Chain: C: PDB Molecule:phosphatidylserine synthase; PDBTitle: crystal structure of phosphatidylserine synthase haemophilus2 influenzae rd kw20 Resolution 2.20 Å

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		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380				.	.	.	.	.	.	.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.														.	.
Query SS confidence																																									.	.	.														.	.
Query Sequence		L	L	Y	Y	P	Y	H	T	F	E	H	V	L	E	L	L	R	Q	A	S	F	D	P	S	V	L	A	I	K	I	N	I	Y	R	V	A	K	D	S	.	.	.	R	I	I	D	S	M	I	H	A	A	H	N	G	.	.	K	K	V	T	V	V	V	E	L	Q	A	R	F	D	E	E	A	N	I	H	W	A	K
Query Conservation																																									.	.	.														.	.
Alig confidence																							.	.	.	.	.														.	.	.														.	.
Template Conservation																							.	.	.	.	.
Template Sequence		F	L	G	S	S	A	E	F	K	T	Q	I	I	E	L	I	R	N	A	K	K	.	.	.	.	.	R	I	Y	V	T	A	L	Y	W	Q	K	D	E	A	G	Q	E	I	L	D	E	I	Y	R	V	K	Q	E	N	P	H	L	D	V	K	V	L	I	D	W	H	R	A	Q	R	N	L	L	S	A	T	N	A	D
Template Known Secondary structure					S																S	S	.	.	.	.	.							S		B		S	S																		T	T									T	T	G	G	G	S
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430															.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.					.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Query Sequence		R	L	T	E	A	G	V	H	V	I	F	S	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	K	I	H	A	K	L	F	L	I	S	R	K	E	N	G	E	V	V	R	Y	A	H	I	G	T	G	N	F	N	E	K	T	A	R	L	.	.	.	.	Y	T	D	Y	S	L	L	T	A	D	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.
Template Sequence		W	Y	C	E	Q	R	Q	T	Y	Q	L	P	D	D	P	N	X	F	F	G	V	P	I	N	T	R	E	V	F	G	V	L	H	V	K	G	F	V	F	D	D	T	.	.	.	.	.	.	.	.	V	L	Y	S	G	A	S	I	N	N	V	Y	L	H	Q	F	E	K	Y	R	Y	D	R	Y	Q	K	I	T	H	A
Template Known Secondary structure													S	S										S	S	S	S	G	G	G											T	T		.	.	.	.	.	.	.	.					S			B	S	T	T	T	T	T		S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.									.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.																																											.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	T	N	E	V	R	R	V	F	N	F	I	E	N	P	Y	R	P	V	T	F	D	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	S	P	Q	N	S	R	R	L	L	Y	E
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	A	D	S	X	V	N	F	I	N	D	Y	L	L	D	F	S	A	V	Y	P	L	D	V	T	N	R	P	R	T	K	E	I	R	G	N	I	R	A	Y	R	K	D	L	A	Q	N	G	E	Y	S	L	K	S	A	V	K	L	P	N	V	L	S	V	S	P	L	F	G	L	G	A	S	G	N	E	L	N	Q
Template Known Secondary structure														T	T			T	T	T				S	S	S	S					T	G	G	G																				S	S		B	S	S		S	S										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.		.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	D	R	E	I	A	N	A	Q	Q	G	L	P	S	G	I	T	L	K	.	L	N	N	L	V	D	K	G	L	V	D	R	L	Y	A	A	S	S	S	G	V	P	V	N	L	L	V	R	G	M	C	S	L	I	P	N	L	E	G	I	S	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.						.																											.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	E	D	L	F	L	Q	V	Q	K	.	.	.	.	K	L	V	I	C	T	P	Y	F	N	F	P	R	T	L	Q	H	K	I	A	T	L	L	E	N	G	K	R	V	E	I	I	.	.	.	.	.	.	.	.	.	.	V	G	D	K	V	A	N	D	F	Y	I	P	P	E	Q	P	F	K	X	A	G	A	L
Template Known Secondary structure									T		S	S	.	.	.	.							S	S	S																T	T							.	.	.	.	.	.	.	.	.	.				G	G	G	S	T	T				T	T	S				G	G	G	G
Template Predicted Secondary structure													.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.					270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.											.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
																											580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	A	I	S	I	V	D	R	Y	L	E	H	D	R	V	Y	I	F	E	N	G	G	D	K	K	V	Y	L	S	S	A	D	W	M	T	R	N	I	D	Y	R	I	E	V	A	T	P	L	L	D	P	R	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.							.	.						.																												.	.
Template Conservation																																						.							.	.						.
Template Sequence		P	Y	L	Y	E	S	N	L	R	R	F	C	E	K	F	E	T	Q	I	E	S	G	Q	L	V	V	R	L	W	R	D	G	D	N	T	Y	.	H	L	K	G	V	W	.	.	V	D	D	R	Y	.	I	L	L	T	G	N	N	L	N	P	R	A	W	R	L	D	A	E	N	G	L	L	I	Y	D	P	Q	Q	Q
Template Known Secondary structure																T							T	S									T	T				.							.	.		T	T	T		.								S	S	T	T	T	T	T	T	S										T	T		T
Template Predicted Secondary structure																																						.							.	.						.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.	.	.	.	.	.			.	.	.	370	.		.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		633	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	Q	R	V	L	D	I	I	D	I	L	F	S	D	T	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	A	Q	V	E	K	E	Q	N	Q	I	R	Q	H	T	K	V
Template Known Secondary structure		T												G	G	G
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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