Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7B1
Confidence100.00%DateThu Jan 5 11:05:15 GMT 2012
Rank1Aligned Residues687
% Identity100%Templatec1xdoB_
PDB info PDB header:transferaseChain: B: PDB Molecule:polyphosphate kinase; PDBTitle: crystal structure of escherichia coli polyphosphate kinase
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  GQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQ
Query Conservation         






 

 


 

 
   








 
 












 
              

 


  
 
Alig confidence 















































































Template Conservation         






 

 


 

 
   








 
 












 
              

  

  
 
Template Sequence  GQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQ
Template Known Secondary structure 

S
SS


TTS
TTT


S
Template Predicted Secondary structure 



























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  SRVLKADQEFDGLYNELLLEMARNQIFLINERQLSVNQQNWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVEI
Query Conservation    
          
  


 
   

 
    


  
   
  

   
 
 


  

  


 


 
  
 


 
Alig confidence 















































































Template Conservation    
          
  


 
   

      

   
   
  

   
 
 


  

  


 
 
 
  
 
 
 
Template Sequence  SRVLKADQEFDGLYNELLLEMARNQIFLINERQLSVNQQNWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVEI
Template Known Secondary structure  TT
GGG

TTTGGG




TT

TTTTS
TT
Template Predicted Secondary structure 




















Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  IRGDTIRYALLEIPSDKVPRFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVHEMEA
Query Conservation          
 
 

   




 

         

 




   
  



     
     








 



   
Alig confidence 















































































Template Conservation          
 
 

   




 

          
 




   
  



   
 
     








 



   
Template Sequence  IRGDTIRYALLEIPSDKVPRFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVHEMEA
Template Known Secondary structure  TT

TTTS
S



SSTT
TTT


S




TTSSS
T
Template Predicted Secondary structure 

































Template SS confidence 















































































   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  SLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVLREKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRH
Query Conservation 

   
   

 
  
  



    

      
   
 
   

    
                  
   
  
   
Alig confidence 















































































Template Conservation 

   
   

 
  
  



    

  
   
   
 
   

    
                  
   
  
   
Template Sequence  SLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVLREKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRH
Template Known Secondary structure 

S


TTS
TT

SS


S


GGGGGG



S
GGGS





B

Template Predicted Secondary structure 




































Template SS confidence 















































































   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  IWFDKAQFRNGFDAIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHNGKKVTVVVE
Query Conservation           


  
  





 




  

 

 


 

 









 
  
 

 


 

  

 
 



Alig confidence 















































































Template Conservation           


  
  





 




  

 

 


 

 
 









  
 

 


 

  

 
 



Template Sequence  IWFDKAQFRNGFDAIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHNGKKVTVVVE
Template Known Secondary structure  GGGG
TT
SSS
TTTB
TTT
TTSS

SS
T


Template Predicted Secondary structure 




























Template SS confidence 















































































   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   402.......410.........420.........430.........440.........450.........460.........470.........480.
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  LQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRKENGEVVRYAHIGTGNFNEKTARLYTDYSLLTADARIT
Query Conservation 






  

 

  

 


 
 

   

 
 
  

 


   
  
  




 
  

  


  
 
    
 
Alig confidence 















































































Template Conservation 






  

 

  

 


 
 

   

 
 

 

 


   
  
  






  

  


  
 
    
 
Template Sequence  LQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRKENGEVVRYAHIGTGNFNEKTARLYTDYSLLTADARIT
Template Known Secondary structure  S

SS

GGGSSTTT


TT

B

TTSS
S
TT


Template Predicted Secondary structure 




























Template SS confidence 















































































   402.......410.........420.........430.........440.........450.........460.........470.........480.
 
   482.......490.........500.........510.........520.........530.........540.........550.........560.
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  NEVRRVFNFIENPYRPVTFDYLMVSPQNSRRLLYEMVDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASSSGVPVNL
Query Conservation   
    
  
           
 


   
      
  

  
  
    
  
 
 
 
  

  
  

 


 
 
Alig confidence 















































































Template Conservation   
    
  
           
 


   
      
  

  
  
    

 
 
 
 
  

  
  

 


 
 
Template Sequence  NEVRRVFNFIENPYRPVTFDYLMVSPQNSRRLLYEMVDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASSSGVPVNL
Template Known Secondary structure 
TTS



SS
TTSTTTT



S
B

TT

Template Predicted Secondary structure 
























Template SS confidence 















































































   482.......490.........500.........510.........520.........530.........540.........550.........560.
 
   562.......570.........580.........590.........600.........610.........620.........630.........640.
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  LVRGMCSLIPNLEGISDNIRAISIVDRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEVATPLLDPRLKQRVLDII
Query Conservation 







 


 
 



 
 











  
 
 
   


 


 
 


  



  

 
      
  

Alig confidence 















































































Template Conservation 







 


 
 



 
 











  
 
 
   


 


 
 


  


   

 
         

Template Sequence  LVRGMCSLIPNLEGISDNIRAISIVDRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEVATPLLDPRLKQRVLDII
Template Known Secondary structure  SS
B


S

TTTSTT

SS



TTS
S

BSTSB

S
Template Predicted Secondary structure 




































Template SS confidence 















































































   562.......570.........580.........590.........600.........610.........620.........630.........640.
 
   642.......650.........660.........670.........680........
Predicted Secondary structure 


















Query SS confidence 














































Query Sequence  DILFSDTVKARYIDKELSNRYVPRGNRRKVRAQLAIYDYIKSLEQPE
Query Conservation     
 

 

  
  

 
            

              
Alig confidence 














































Template Conservation     
 

 

  
   
 
            

              
Template Sequence  DILFSDTVKARYIDKELSNRYVPRGNRRKVRAQLAIYDYIKSLEQPE
Template Known Secondary structure  T
SSS

TT



B



SS



TS

Template Predicted Secondary structure 



















Template SS confidence 














































   642.......650.........660.........670.........680........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions