Job Description P0A7B1 Confidence 99.88% Date Thu Jan 5 11:05:15 GMT 2012 Rank 12 Aligned Residues 246 % Identity 20% Template c1v0sA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:phospholipase d; PDBTitle: uninhibited form of phospholipase d from streptomyces sp.2 strain pmf Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		380	.	.	.	.	.	.	.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430													.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure																.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	I	I	D	S	M	I	H	A	A	H	N	G	.	.	K	K	V	T	V	V	V	E	L	Q	A	R	F	D	E	E	A	N	I	H	W	A	K	R	L	T	E	A	G	V	H	V	I	F	S	A	P	.	.	.	.	.	.	.	.	.	.	.	.	G	L	K	I	H	A	K	L	F	L	I	S	R	K	E
Query Conservation																.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.
Template Sequence		D	A	I	V	A	G	L	K	E	S	A	A	K	G	N	K	L	K	V	R	I	L	V	G	A	A	P	M	N	V	I	P	S	.	.	K	Y	R	D	E	L	T	A	K	L	G	K	A	A	E	N	I	T	L	N	V	A	S	M	T	T	S	K	T	A	F	S	W	N	H	S	K	I	L	V	V	D	G	Q	S
Template Known Secondary structure														T	T																				.	.											G	G	G	G	T	T										S	B	T	T	T	T	B		B								T	T	T
Template Predicted Secondary structure																																			.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.					.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	E	V	V	R	Y	A	H	I	G	T	G	N	F	N	.	.	.	.	E	K	T	A	R	L	Y	T	D	Y	S	L	L	T	A	D	A	R	I	T	N	E	V	R	R	V	F	N	F	I	E	N	P	Y	R	P	V	T	F	D	Y	L	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.										.	.	.	.																		.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																															.
Template Sequence		.	.	.	.	.	.	.	A	L	T	G	G	I	N	S	W	K	D	D	Y	L	D	T	T	H	P	V	S	D	V	D	L	A	L	T	G	P	.	A	A	G	S	A	G	R	Y	L	D	T	L	W	T	W	T	C	Q	N	K	S	N	I	A	S	V	W	F	A	A	S	G	N	A	G	C	M	P	T	M	H	K
Template Known Secondary structure		.	.	.	.	.	.	.					S									T	S	S	S	S			B								S		.																			T	T	T		T	T	T						S	T	T					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																															.
Template SS confidence
									181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
																																																											506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	Q	N	S	R	R	L	L	Y	E	M	V	D	R	E	I	A	N	A	Q	Q	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																																																																	.
Template Sequence		D	T	N	P	K	A	S	P	A	T	G	N	V	P	V	I	A	V	G	G	L	G	V	G	I	K	D	V	D	P	K	S	T	F	R	P	D	L	P	T	A	S	D	T	K	C	V	V	G	L	H	D	N	T	N	A	D	R	D	Y	D	T	V	N	P	E	E	S	A	L	R	A	L	V	A	S	A	K	G	.
Template Known Secondary structure				S		S	S					S	S											S	S	S		S			T	T												S			S	S	T	T				T	T	T	S							T													T		S	S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		529	530	.	.	.	.	.	.	.	.	.	540										.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	S	G	I	T	L	K	L	N	N	L	.	.	.	.	.	.	.	.	.	V	D	K	G	L	V	D	R	L	Y	A	A	S	S	S	G	V	P	V	N	L	L	V	R	G	M	C	S	L	I	P	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.										.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	H	I	E	I	S	Q	Q	D	L	N	A	T	C	P	P	L	P	R	Y	D	I	R	L	Y	D	A	L	A	A	K	M	A	A	G	V	K	V	R	I	V	V	S	D	P	A	N	R	G	Y	S	Q	I	K	S	L	S	E	I	S	D	T	L	R	N	R	L	A	N	I	T	G	G	Q	Q	A	A	K
Template Known Secondary structure		.	.	.							S		S	S			T	T	T	S		S															T	T										G	G	G							S		T																S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		574	.	.	.	.	.	580	.	.	.	.	.	.												.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.		640	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.																																																						.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.																																																						.
Query Sequence		E	G	I	S	D	N	I	R	A	I	S	I	V	.	.	.	.	.	.	.	.	.	.	.	D	R	Y	L	E	H	D	R	V	Y	I	F	E	N	G	G	D	K	K	V	Y	L	S	S	A	D	W	M	T	R	N	I	D	Y	R	I	E	V	A	T	P	L	L	D	P	R	L	K	Q	R	V	L	D	.	I	I
Query Conservation															.	.	.	.	.	.	.	.	.	.	.																																																						.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.					.							.	.						.														.	.	.																			.
Template Conservation																														.							.	.						.														.	.	.
Template Sequence		T	A	M	C	S	N	L	Q	L	A	T	F	R	S	S	P	N	G	K	W	A	D	G	H	P	Y	A	Q	.	H	H	K	L	V	S	.	.	V	D	S	S	T	.	F	Y	I	G	S	K	N	L	Y	P	S	W	L	.	.	.	Q	D	F	G	Y	I	V	E	S	P	E	A	A	K	Q	L	D	A	K	L	L
Template Known Secondary structure															S	S	S	S	S	S		T	T	S					B	.							.	.		T	T	T		.					S			S	S				S	.	.	.	B																			T
Template Predicted Secondary structure																														.							.	.						.														.	.	.
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.		.	.	450	.	.	.			.	.	.	.	.		.	460	.	.	.	.	.	.	.	.	.	470	.				.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		642	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	L	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	Q	W	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		493	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions