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Job DescriptionP0A7B1
Confidence99.88%DateThu Jan 5 11:05:15 GMT 2012
Rank12Aligned Residues246
% Identity20%Templatec1v0sA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:phospholipase d; PDBTitle: uninhibited form of phospholipase d from streptomyces sp.2 strain pmf
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   380.........390... ......400.........410.........420.........430 .........440.....
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Query Sequence  SRIIDSMIHAAHNG. . KKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAP. . . . . . . . . . . . GLKIHAKLFLISRKE
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Template Sequence  DAIVAGLKESAAKGNKLKVRILVGAAPMNVIPS. . KYRDELTAKLGKAAENITLNVASMTTSKTAFSWNHSKILVVDGQS
Template Known Secondary structure  TT







..GGGGTT
SBTTTTB
B


TTT
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   100.........110.........120.........130.. .......140.........150.........160.........170.......
 
   446...450.........460. ........470.........480.........490.........500.....
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Query Sequence  NGEVVRYAHIGTGNFN. . . . EKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMV. . . . . . . . . . . . . . . .
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Template Sequence  . . . . . . . ALTGGINSWKDDYLDTTHPVSDVDLALTGP. AAGSAGRYLDTLWTWTCQNKSNIASVWFAASGNAGCMPTMHK
Template Known Secondary structure  .......S



TSSSS

BS.TTT
TTTSTT



TT
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   181........190.........200.........210 .........220.........230.........240.........250..
 
   506...510.........520........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SPQNSRRLLYEMVDREIANAQQG
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Template Sequence  DTNPKASPATGNVPVIAVGGLGVGIKDVDPKSTFRPDLPTASDTKCVVGLHDNTNADRDYDTVNPEESALRALVASAKG.
Template Known Secondary structure  S
SS



SS


SSS
S

TT










S

SSTT


TTTS
T
T
SS.
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   253......260.........270.........280.........290.........300.........310.........320.........330.
 
   529530.........540 .........550.........560.........570...
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Query Sequence  LPSGITLKLNNL. . . . . . . . . VDKGLVDRLYAASSSGVPVNLLVRGMCSLIPNL. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . HIEISQQDLNATCPPLPRYDIRLYDALAAKMAAGVKVRIVVSDPANRGYSQIKSLSEISDTLRNRLANITGGQQAAK
Template Known Secondary structure  ...S
SS

TTTS
S

TT


GGG





S
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   336...340.........350.........360.........370.........380.........390.........400.........410..
 
   574.....580...... ...590.........600.........610.........620.........630......... 640.
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Query Sequence  EGISDNIRAISIV. . . . . . . . . . . DRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEVATPLLDPRLKQRVLD. II
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Template Sequence  TAMCSNLQLATFRSSPNGKWADGHPYAQ. HHKLVS. . VDSST. FYIGSKNLYPSWL. . . QDFGYIVESPEAAKQLDAKLL
Template Known Secondary structure 

SSSSSS
TTS



B.

..TTT.S

SS


S...B

T
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   420.........430.........440....... ..450... ..... .460.........470. ........480.........490..
 
   642....
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Query Sequence  DILFS
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Template Sequence  DPQWK
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   493....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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