Job Description P0A7B1 Confidence 39.18% Date Thu Jan 5 11:05:15 GMT 2012 Rank 80 Aligned Residues 85 % Identity 13% Template c1nopB_ PDB info PDB header:hydrolase/dna Chain: B: PDB Molecule:tyrosyl-dna phosphodiesterase 1; PDBTitle: crystal structure of human tyrosyl-dna phosphodiesterase2 (tdp1) in complex with vanadate, dna and a human3 topoisomerase i-derived peptide Resolution 2.30 Å

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		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.							.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		G	I	T	L	K	L	N	N	L	V	D	K	G	L	V	D	R	L	Y	A	A	S	S	S	G	V	P	V	N	L	L	V	R	G	M	C	S	L	I	P	N	L	E	G	I	S	D	N	I	R	A	I	S	I	V	D	R	Y	L	E	.	.	.	.	.	.	H	D	R	V	Y	I	F	E	N	G	G	D	K	K
Query Conservation																																																														.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	S	A	Q	F	N	Y	C	F	D	V	D	W	L	V	K	Q	Y	P	P	E	F	R	K	K	P	I	L	L	V	H	G	D	K	R	E	A	K	A	H	L	H	A	Q	A	K	P	Y	E	N	I	S	L	C	Q	A	K	L	D	I	A	F	G	T	H	H	T	K	M	M	L	L	L	Y	E	E	G	L	R
Template Known Secondary structure									S		B									S		G	G	G	T	T	S																					T	T		T	T										S	T	T			B										S	S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		606	.	.	.	610	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	L	S	S	A	D	W	M	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	I	H	T	S	N	L	I	H	A
Template Known Secondary structure									B	S	T	G
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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