Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7B1
Confidence39.18%DateThu Jan 5 11:05:15 GMT 2012
Rank80Aligned Residues85
% Identity13%Templatec1nopB_
PDB info PDB header:hydrolase/dnaChain: B: PDB Molecule:tyrosyl-dna phosphodiesterase 1; PDBTitle: crystal structure of human tyrosyl-dna phosphodiesterase2 (tdp1) in complex with vanadate, dna and a human3 topoisomerase i-derived peptide
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   532.......540.........550.........560.........570.........580.........590. ........600.....
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Query Sequence  GITLKLNNLVDKGLVDRLYAASSSGVPVNLLVRGMCSLIPNLEGISDNIRAISIVDRYLE. . . . . . HDRVYIFENGGDKK
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Template Sequence  VSSAQFNYCFDVDWLVKQYPPEFRKKPILLVHGDKREAKAHLHAQAKPYENISLCQAKLDIAFGTHHTKMMLLLYEEGLR
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S
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STT

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   197..200.........210.........220.........230.........240.........250.........260.........270......
 
   606...610......
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Query Sequence  VYLSSADWMTR
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Template Sequence  VVIHTSNLIHA
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BSTG
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   277..280.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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