Job Description P75949 Confidence 100.00% Date Thu Jan 5 12:16:19 GMT 2012 Rank 6 Aligned Residues 305 % Identity 20% Template d1x38a1 SCOP info TIM beta/alpha-barrel (Trans)glycosidases NagZ-like Resolution 1.70

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																			.	.	.	.																		.	.	.	.	.
Query SS confidence																																			.	.	.	.																		.	.	.	.	.
Query Sequence		V	M	L	D	V	E	G	Y	E	L	D	A	E	E	R	E	I	L	A	H	P	L	V	G	G	L	I	L	F	T	R	N	Y	.	.	.	.	H	D	P	A	Q	L	R	E	L	V	R	Q	I	R	A	A	S	.	.	.	.	.	R	N	R	L	V	V	A	V	D	Q	E	G	G	R	V	Q	R	F	R	E	G
Query Conservation																																			.	.	.	.																		.	.	.	.	.
Alig confidence										.	.	.	.	.																					.	.	.	.																		.	.	.	.	.																			.	.
Template Conservation										.	.	.	.	.																																																																	.	.
Template Sequence		T	Q	I	E	R	L	V	A	.	.	.	.	.	T	P	D	V	L	R	D	N	F	I	G	S	L	L	S	G	G	G	S	V	P	R	K	G	A	T	A	K	E	W	Q	D	M	V	D	G	F	Q	K	A	C	M	S	T	R	L	G	I	P	M	I	Y	G	I	D	A	V	H	G	Q	N	N	V	Y	.	.	G
Template Known Secondary structure						G	G	G		.	.	.	.	.								T	T								T	T			S	S	T	T																			T	S	S	S											S	S	S	S	T	T	S	T	.	.	T
Template Predicted Secondary structure										.	.	.	.	.																																																																	.	.
Template SS confidence
		33	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																													.	.	.
Query SS confidence																																																													.	.	.
Query Sequence		F	T	R	L	P	A	A	Q	S	F	A	A	L	S	G	M	E	E	G	G	K	L	A	Q	E	A	G	W	L	M	A	S	E	M	I	A	M	D	I	D	I	S	F	A	P	V	L	D	V	G	H	I	S	A	A	I	G	E	R	.	.	.	S	Y	H	A	D	P	Q	K	A	L	A	I	A	S	R	F	I	D
Query Conservation																																																													.	.	.
Alig confidence																			.	.	.	.																																		.	.				.	.	.														.
Template Conservation																			.	.	.	.																																		.	.																				.
Template Sequence		A	T	I	F	P	H	N	V	G	L	G	A	T	R	D	P	Y	.	.	.	.	L	V	K	R	I	G	E	A	T	A	L	E	V	R	A	T	G	I	Q	Y	A	F	A	P	C	I	A	V	C	R	D	P	R	.	.	W	G	R	C	Y	E	S	Y	S	E	D	R	R	I	V	Q	S	M	T	.	E	L	I	P
Template Known Secondary structure															T				.	.	.	.																T	T								B					S		T	T	.	.	S	T	T	G	G	G	S	S		S	S							G	G	.	G
Template Predicted Secondary structure																			.	.	.	.																																		.	.																				.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.
		152	.	.																	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	M	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	G	M	K	T	T	G	K	H	F	P	G	H	G	A	V	T	A	D	S	H	K	E	T	P	C	D	P	R	P	Q	A	E	I	R	A	K	D	M	S	V	F	S	S	L	I	R	E	N	K	L	D	A	I	M	P	A	H	V	I
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.																					.								.	.	.
Template Conservation																																																	.	.																					.								.	.	.
Template Sequence		G	L	Q	G	D	V	P	K	D	F	T	S	G	M	P	F	V	A	G	K	N	K	V	A	A	C	A	K	H	F	V	G	D	G	G	T	V	D	G	I	N	E	N	N	T	I	I	.	.	N	R	E	G	L	M	N	I	H	M	P	A	Y	K	N	A	M	D	K	G	.	V	S	T	V	M	I	S	.	.	.
Template Known Secondary structure									T	T			T	T						S	T	T	S		B							T	T	G	G	G		G	G	G		T	T						.	.									T	S									T	T	.								.	.	.
Template Predicted Secondary structure																																																	.	.																					.								.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		Y	S	D	V	D	P	R	P	A	S	G	S	P	Y	W	L	K	T	V	L	R	Q	E	L	G	F	D	G	V	I	F	S	D	D	L	S	M	E	G	A	A	I	M	G	.	.	S	Y	A	E	R	G	Q	A	S	L	D	A	G	C	D	M	I	L	V	C	N	N	R	K	G	A	V	S	V	L	D	N	L	S
Query Conservation																																														.	.
Alig confidence																																														.	.																														.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		Y	S	S	W	N	G	V	K	M	H	A	N	Q	D	L	V	T	G	Y	L	K	D	T	L	K	F	K	G	F	V	I	S	D	W	E	G	I	D	R	I	T	T	P	A	G	S	D	Y	S	Y	S	V	K	A	S	I	L	A	G	L	D	M	I	M	V	P	N	K	Y	Q	Q	F	I	S	I	.	.	.	.	.
Template Known Secondary structure		S	S			T	T			G	G	G											T	T	S				S						T	T	T	T	G	G	G	S	S	S	T	T	T	T												T			B					S									.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		P	I	K	A	E	R	V	T	R	L	Y	H	K	G	S	F	S	R	Q	E	L	M	D	S	A	.	R	W	K	A	I	S	T	R	L	N	Q	L	H	E	R	W	Q	E	E	K	A
Query Conservation																											.
Alig confidence		.	.	.	.	.	.																				.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	L	T	G	H	V	N	G	G	V	I	P	M	S	R	I	D	D	A	V	T	R	I	L	R	V	K	F	T	M	G	L	F	E	N	P	Y	A	D	P	A	M
Template Known Secondary structure		.	.	.	.	.	.							T	T	S	S																			T	T	T	T	T			S			G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions