Job Description P75949 Confidence 100.00% Date Thu Jan 5 12:16:19 GMT 2012 Rank 1 Aligned Residues 323 % Identity 28% Template c3sqlB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:glycosyl hydrolase family 3; PDBTitle: crystal structure of glycoside hydrolase from synechococcus Resolution 2.25 Å

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		3	.	.	.	.	.	.	10	.												.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	M	L	D	V	E	G	Y	.	.	.	.	.	.	.	.	.	.	.	E	L	D	A	E	E	R	E	I	L	A	H	P	L	V	G	G	L	I	L	F	T	R	N	Y	H	D	P	A	Q	L	R	E	L	V	R	Q	I	R	A	A	S	R	N	R	L	V	V	A	V	D	Q	E	G	G	R	V	Q	R	F
Query Conservation											.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation																																														.	.	.
Template Sequence		X	I	V	V	R	G	A	G	Y	L	F	D	Y	E	R	P	Y	P	Q	W	E	A	D	Q	T	T	L	Q	R	W	I	E	A	G	I	G	G	V	I	L	L	G	G	S	.	.	.	A	A	E	V	A	Q	K	T	K	Q	L	Q	S	W	A	E	I	P	L	L	I	A	A	D	I	E	E	G	V	G	Q	R	F
Template Known Secondary structure		T							S	S	S	S	G	G	G		S		T	T	T	S												T	T									S		.	.	.														T		S	S									T	T		G	G	G	T	S
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.																																				.	.
Query SS confidence																						.	.																																				.	.
Query Sequence		R	E	G	F	T	R	L	P	A	A	Q	S	F	A	A	L	S	G	M	E	.	.	E	G	G	K	L	A	Q	E	A	G	W	L	M	A	S	E	M	I	A	M	D	I	D	I	S	F	A	P	V	L	D	V	G	H	I	.	.	S	A	A	I	G	E	R	S	Y	H	A	D	P	Q	K	A	L	A	I	A	S
Query Conservation																						.	.																																				.	.
Alig confidence		.																				.	.																																				.	.
Template Conservation		.
Template Sequence		.	R	G	A	T	E	F	P	P	P	X	A	F	G	E	I	W	R	T	D	P	H	Q	A	I	A	L	A	E	T	X	G	A	T	T	A	Q	E	A	L	S	L	G	I	N	W	V	L	A	P	V	L	D	V	N	N	N	P	H	N	P	V	I	N	I	R	A	F	G	E	T	P	D	Q	V	S	A	L	G	T
Template Known Secondary structure		.	T	T	S																																							T								B						S	T	T		S	S	S	G	G	G	S	S		S	S
Template Predicted Secondary structure		.
Template SS confidence
			98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		R	F	I	D	G	M	H	E	A	G	M	K	T	T	G	K	H	F	P	G	H	G	A	V	T	A	D	S	H	K	E	T	P	C	D	P	R	P	Q	A	E	I	R	A	K	D	M	S	V	F	S	S	L	I	R	E	N	K	L	D	A	I	M	P	A	H	V	I	Y	S	D	V	D	P	R	.	P	A	S	G
Query Conservation																																																																													.
Alig confidence																																																											.																		.
Template Conservation																																																											.
Template Sequence		A	F	I	R	G	A	Q	Q	Y	A	V	L	T	T	A	K	H	F	P	G	H	G	D	T	A	T	D	S	H	L	A	L	P	T	I	S	H	D	D	T	R	L	N	T	V	E	L	P	P	F	K	A	A	I	Q	G	G	.	V	D	A	V	X	N	A	H	L	X	I	P	A	W	D	Q	Q	Y	P	A	T	L
Template Known Secondary structure								T	T	S	S		B							T				S		S			T	T	T	S			B											T	T	S									T	T	.		S								B		T	T	T		S	S	S		G	G	G
Template Predicted Secondary structure																																																											.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	Y	W	L	K	T	V	L	R	Q	E	L	G	F	D	G	V	I	F	S	D	D	L	S	M	E	G	A	A	I	M	G	S	Y	A	E	R	G	Q	A	S	L	D	A	G	C	D	M	I	L	V	C	N	N	R	K	G	A	V	S	V	L	D	N	L	S	P	I	K	A	E	R	V	T	R	L	Y	H	K
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	A	I	L	T	G	Q	L	R	H	K	L	G	F	K	G	L	I	V	T	D	A	L	V	X	G	G	I	T	Q	F	A	A	P	D	T	V	V	V	Q	A	I	A	A	G	A	D	I	L	L	X	P	P	D	V	D	G	A	I	I	A	.	.	.	.	.	.	.	.	.	.	.	I	E	T	A	I	K	T
Template Known Secondary structure														T				S							T	T	S					T	T	S													T		S	B			S		S									.	.	.	.	.	.	.	.	.	.	.							T
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.												.	.	320	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		G	S	F	S	R	Q	E	L	M	D	S	A	.	R	W	K	A	I	S	T	R	L	N	Q	L	H	E	R	W	Q	E	E	K	A	G	H
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		G	Q	L	S	E	S	R	I	Y	E	S	V	E	R	I	W	Q	A	K	Q	K	I	L	T	P	S	T	F	P	Q	G	I	S	G	D	R
Template Known Secondary structure		T	S	S																									T	T	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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