Job Description P75949 Confidence 19.33% Date Thu Jan 5 12:16:19 GMT 2012 Rank 25 Aligned Residues 100 % Identity 17% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		3	.	.	.	.	.					.	10	.	.	.	.					.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure								.	.	.	.							.	.	.	.																							.
Query SS confidence								.	.	.	.							.	.	.	.																							.
Query Sequence		P	V	M	L	D	V	.	.	.	.	E	G	Y	E	L	D	.	.	.	.	A	E	E	R	E	I	L	A	H	P	L	V	G	G	L	I	L	F	T	R	N	Y	.	H	D	P	A	Q	L	R	E	L	V	R	Q	I	R	A	A	S	R	N	R	L	V	V	A	V	D	Q	E	G	G	R	V	Q	R	F	R	E
Query Conservation								.	.	.	.							.	.	.	.																							.
Alig confidence								.	.	.	.							.	.	.	.																		.	.	.			.																												.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.																															.	.	.	.	.	.	.	.	.	.
Template Sequence		F	L	I	A	H	M	T	F	D	E	K	G	R	S	L	T	G	T	D	P	A	N	F	A	I	T	F	D	E	L	D	I	D	A	L	G	I	.	.	.	N	C	S	L	G	P	E	E	I	L	P	I	F	Q	E	L	S	Q	Y	T	D	K	F	L	V	V	E	P	N	A	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	S			T	T	S												T	S	S		S					.	.	.		S	S	S														T	T			S									.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	T	R	L	P	A	A	Q	S	F	A	A	L	S	G	M	E	E	G	G	K	L	A	Q	E	A	G	W	L	M	A	S	E	M	I	A	M	D	I	D	I	S	F	A	P	V	L	D	V	G	H	I	S	A	A	I	G	E	R	S	Y	H	A	D	P	Q	K	A	L	A	I	A	S	R	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	G	Y	P	L	K	P	H	D	F	A	V	H	I	D	S	.	.	.	.	.	.	.	.	Y	Y	E	L	G	V	N	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	.	C	C	G	T	T	P	E	H	V	K	L	F	R	K	V	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.											T	T				.	.	.	.	.	.	.	.			T	T	T		S			.	.	.	.	.	.	.	.	.	.	.	.	.	.			.		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Template SS confidence
													236	.	.	.	240	.	.	.	.	.	.	.	.	.	250									.	.	.	.	.	.	.	.	.															260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions