Job Description P75949 Confidence 7.34% Date Thu Jan 5 12:16:19 GMT 2012 Rank 75 Aligned Residues 215 % Identity 12% Template c1ps9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2,4-dienoyl-coa reductase; PDBTitle: the crystal structure and reaction mechanism of e. coli 2,4-2 dienoyl coa reductase Resolution 2.20 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		R	N	Y	H	D	P	A	Q	L	R	E	L	V	R	Q	I	R	A	A	S	R	N	R	L	V	V	A	V	D	Q	E	G	G	R	V	Q	R	F	R	E	G	F	T	R	L	P	A	A	Q	S	F	A	A	L	S	.	.	.	.	G	M	E	E	G	G	K	L	A	Q	E	A	G	W	L	M	A	S	E	M	I
Query Conservation																																																									.	.	.	.
Alig confidence																					.											.																									.	.	.	.																			.
Template Conservation																					.											.																																															.
Template Sequence		N	D	A	S	Q	I	P	H	H	R	T	I	T	E	A	V	H	Q	E	.	G	G	K	I	A	L	Q	I	L	H	.	T	G	R	Y	S	Y	Q	P	H	L	V	A	P	S	A	L	Q	A	P	I	N	R	F	V	P	H	E	L	S	H	E	E	I	L	Q	L	I	D	N	F	A	R	C	A	Q	L	.	A	R
Template Known Secondary structure			S	G	G	G														T	.	T										.		G	G	G	S	B	S	T	T				S	S	S				T	T		S	S																								.
Template Predicted Secondary structure																					.											.																																															.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.										.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.									.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.									.	.
Query Sequence		A	M	D	I	D	I	S	F	A	P	V	L	D	V	G	H	I	.	.	.	.	.	.	.	.	.	S	A	A	I	G	E	R	S	.	.	Y	H	A	D	P	Q	K	A	L	A	I	A	S	R	F	I	D	G	M	H	E	A	G	M	K	T	T	G	K	H	F	P	G	H	G	A	V	T	A	D	S	H	K	E
Query Conservation																			.	.	.	.	.	.	.	.	.									.	.
Alig confidence							.	.	.	.	.								.	.	.	.	.	.	.	.	.									.	.																						.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.																																																.	.	.	.									.	.	.	.	.	.	.	.
Template Sequence		E	A	G	Y	D	.	.	.	.	.	G	V	E	V	M	G	S	E	G	Y	L	I	N	E	F	L	T	L	R	T	N	Q	R	S	D	Q	W	G	G	D	Y	R	N	R	M	R	F	A	V	E	V	V	R	A	V	R	E	.	.	.	.	R	V	G	N	D	F	I	I	.	.	.	.	.	.	.	.	I	Y	R
Template Known Secondary structure			T	T		S	.	.	.	.	.								B	T	S								T	T	T					S	T	T	S	S	S																		.	.	.	.				S	S	S			.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.																																																.	.	.	.									.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.									.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.						220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		T	P	C	D	P	R	P	Q	A	E	I	R	A	K	D	M	S	V	F	S	S	L	I	R	E	N	K	L	D	A	I	M	P	A	H	V	I	Y	S	D	V	.	.	.	.	.	D	P	R	P	A	S	G	S	P	Y	W	L	K	T	V	L	R	Q	E	L	G	F	D	G	V	I	F	S	D	D	L	S	M	E
Query Conservation																																											.	.	.	.	.
Alig confidence																																											.	.	.	.	.														.																.	.	.	.	.
Template Conservation																																																													.																.	.	.	.	.
Template Sequence		L	S	M	L	D	L	V	E	D	G	G	T	F	A	E	T	V	E	L	A	Q	A	I	E	A	A	G	A	T	I	I	N	T	G	I	G	W	H	E	A	R	I	P	T	I	A	T	P	V	P	R	G	A	F	S	W	V	T	R	.	K	L	K	G	H	V	S	L	P	L	V	T	T	N	R	.	.	.	.	.
Template Known Secondary structure								S	T	T																		T		S								B	T	T		S	S		S	S	S	T	T	S		T	T	T	T						.			T	T	S		S	S						S	S	.	.	.	.	.
Template Predicted Secondary structure																																																													.																.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		G	A	A	I	M	G	S	Y	A	E	R	G	Q	A	S	L	D	A	G	.	C	D	M	I	L	V	C
Query Conservation																					.
Alig confidence		.	.	.	.	.															.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	I	N	D	P	Q	V	A	D	D	I	L	S	R	G	D	A	D	M	V	S	M	A
Template Known Secondary structure		.	.	.	.	.			S										T	T	S		S					S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions