Job Description P46883 Confidence 12.88% Date Thu Jan 5 12:04:33 GMT 2012 Rank 51 Aligned Residues 43 % Identity 30% Template d1jsma_ SCOP info Viral protein domain Viral protein domain Influenza hemagglutinin headpiece Resolution 1.90

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		660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	S	F	M	D	K	Q	L	W	V	T	R	Y	H	P	G	E	R	F	P	E	G	K	Y	P	N	R	S	T	H	D	T	G	L	G	Q	Y	S	K	D	N	E	S	L	D	N	T	D	A	V	V	W	M	T	T	G	T	T	H	V	A
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.					.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.					.	.	.
Template Sequence		R	S	S	F	F	R	N	V	V	W	L	I	K	K	N	N	A	Y	P	T	I	K	R	S	Y	N	N	T	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	E	D	L	.	.	.	.	L	I	L	W	.	.	.	G	I	H	H	P	N
Template Known Secondary structure							T	T					B		B	T	T	B												.	.	.	.	.	.	.	.	.	.	.	.	S	S	S			.	.	.	.					.	.	.						S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.					.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.													.	.	170	.	.					.	.	.	.				.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions