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Job DescriptionP46883
Confidence100.00%DateThu Jan 5 12:04:33 GMT 2012
Rank12Aligned Residues423
% Identity100%Templated1d6za1
SCOP infoSupersandwich Amine oxidase catalytic domain Amine oxidase catalytic domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   331........340.........350.........360.........370.........380.........390.........400.........410
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Query Sequence  PAVKPMQIIEPEGKNYTITGDMIHWRNWDFHLSMNSRVGPMISTVTYNDNGTKRKVMYEGSLGGMIVPYGDPDIGWYFKA
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Template Sequence  PAVKPMQIIEPEGKNYTITGDMIHWRNWDFHLSMNSRVGPMISTVTYNDNGTKRKVMYEGSLGGMIVPYGDPDIGWYFKA
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TT

STTTTTTTTTB


STTTTT
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   301........310.........320.........330.........340.........350.........360.........370.........380
 
   411........420.........430.........440.........450.........460.........470.........480.........490
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Query Sequence  YLDSGDYGMGTLTSPIARGKDAPSNAVLLNETIADYTGVPMEIPRAIAVFERYAGPEYKHQEMGQPNVSTERRELVVRWI
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Template Sequence  YLDSGDYGMGTLTSPIARGKDAPSNAVLLNETIADYTGVPMEIPRAIAVFERYAGPEYKHQEMGQPNVSTERRELVVRWI
Template Known Secondary structure 

TTTTB



BTTTB
TT

TTS


TTS

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   381........390.........400.........410.........420.........430.........440.........450.........460
 
   491........500.........510.........520.........530.........540.........550.........560.........570
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Query Sequence  STVGNYDYIFDWIFHENGTIGIDAGATGIEAVKGVKAKTMHDETAKDDTRYGTLIDHNIVGTTHQHIYNFRLDLDVDGEN
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Template Sequence  STVGN. DYIFDWIFHENGTIGIDAGATGIEAVKGVKAKTMHDETAKDDTRYGTLIDHNIVGTTHQHIYNFRLDLDVDGEN
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TTS




S
SSTTSTTTTTTT

TTSS
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   461.... ....470.........480.........490.........500.........510.........520.........530.........
 
   571........580.........590.........600.........610.........620.........630.........640.........650
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Query Sequence  NSLVAMDPVVKPNTAGGPRTSTMQVNQYNIGNEQDAAQKFDPGTIRLLSNPNKENRMGNPVSYQIIPYAGGTHPVAKGAQ
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Template Sequence  NSLVAMDPVVKPNTAGGPRTSTMQVNQYNIGNEQDAAQKFDPGTIRLLSNPNKENRMGNPVSYQIIPYAGGTHPVAKGAQ
Template Known Secondary structure 

S
SS
S
BSB


TTS
TTS
SS
B
SS
S
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   541........550.........560.........570.........580.........590.........600.........610.........620
 
   651........660.........670.........680.........690.........700.........710.........720.........730
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Query Sequence  FAPDEWIYHRLSFMDKQLWVTRYHPGERFPEGKYPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHVARAEEWPIMP
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Template Sequence  FAPDEWIYHRLSFMDKQLWVTRYHPGERFPEGKYPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHVARAEEWPIMP
Template Known Secondary structure  S
TTS
GGGG
S

TT


TT
S

TT
SS

ST

B
SS


GGGSSS
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   621........630.........640.........650.........660.........670.........680.........690.........700
 
   731........740.........750....
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Query Sequence  TEWVHTLLKPWNFFDETPTLGALK
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Template Sequence  TEWVHTLLKPWNFFDETPTLGALK
Template Known Secondary structure  SSSSS
TTS



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   701........710.........720....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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