Job Description P46883 Confidence 100.00% Date Thu Jan 5 12:04:33 GMT 2012 Rank 6 Aligned Residues 608 % Identity 28% Template c3loyB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:copper amine oxidase; PDBTitle: crystal structure of a copper-containing benzylamine oxidase from2 hansenula polymorpha Resolution 2.00 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.							.
Query SS confidence																																																		.	.	.							.
Query Sequence		H	P	L	N	A	L	T	A	D	E	I	K	Q	A	V	E	I	V	K	A	S	A	D	F	K	P	N	T	R	F	T	E	I	S	L	L	P	P	D	K	E	A	V	W	A	F	A	L	.	.	.	E	N	K	P	V	D	.	Q	P	R	K	A	D	V	I	M	L	D	G	K	H	I	I	E	A	V	V	D	L
Query Conservation																																																		.	.	.							.
Alig confidence																																																		.	.	.							.
Template Conservation
Template Sequence		H	P	Y	D	P	I	S	D	A	E	L	Q	L	T	S	Q	L	I	K	D	A	T	K	G	P	E	R	P	H	F	I	Q	I	D	R	L	D	P	P	K	K	D	M	I	R	Y	L	E	A	E	R	T	G	K	P	L	P	H	I	S	R	M	T	Y	V	Y	Y	Y	I	G	L	D	F	Y	K	A	L	V	N	V
Template Known Secondary structure			T	T																					S	S	S																										T	T																	T	T									T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		Q	N	N	K	L	L	S	W	Q	P	I	K	.	D	A	H	G	M	V	L	L	D	D	F	A	S	V	Q	N	I	I	N	N	S	E	E	F	A	A	A	V	K	K	R	G	I	T	D	A	K	K	V	I	T	T	P	L	T	V	G	Y	F	D	G	K	D	G	L	K	Q	D	A	R	L	L	K	V	I	S	Y
Query Conservation														.
Alig confidence														.																																																			.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.
Template Sequence		S	Y	G	H	I	I	T	N	Q	K	Q	P	K	G	V	I	G	P	L	I	A	E	D	I	Q	E	I	E	E	L	A	T	T	H	P	I	V	K	A	E	I	E	K	L	K	L	P	P	H	V	R	V	V	C	D	P	W	M	N	G	T	D	S	.	.	.	.	.	K	E	D	R	M	L	I	Q	C	Y	M	Y
Template Known Secondary structure		T	T	T										T	T																				S									T	T				T	T													S	S	.	.	.	.	.				S
Template Predicted Secondary structure																																																																	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.
		279	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.													310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure				.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	.	.	.	V	G	D	G	N	Y	W	A	H	P	I	E	N	L	V	A	V	V	D	L	E	Q	K	K	I	V	K	I	E	.	.	.	.	.	.	.	.	.	.	.	.	E	G	P	V	V	P	V	P	M	T	A	R	P	F	D	G	R	D	R	V	A	P	A	V	K	P	M	Q	I	I	E	P	E	G
Query Conservation				.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.													.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		L	A	S	A	A	H	P	E	S	N	H	Y	S	L	P	L	K	.	F	S	P	V	F	E	C	L	T	K	K	F	V	R	M	D	Y	L	P	G	G	A	D	E	T	V	T	E	T	Q	A	W	D	E	F	P	F	V	E	Y	H	P	D	L	N	G	E	T	I	V	P	L	K	P	L	I	V	Q	Q	P	E	G
Template Known Secondary structure					T	T		T	T			G	G	G	S	B		S	.							T	T	T	T											S	S	S	S				S													S	T	T	T	S															T	T
Template Predicted Secondary structure																			.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	Y	T	I	T	G	D	M	I	H	W	R	N	W	D	F	H	L	S	M	N	S	R	V	G	P	M	I	S	T	V	T	Y	N	D	N	G	T	K	R	K	V	M	Y	E	G	S	L	G	G	M	I	V	P	Y	G	D	P	D	I	G	W	Y	F	K	A	Y	L	D	S	G	D	Y	G	M	G	T	L	T
Query Conservation
Alig confidence																																						.	.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		P	S	F	N	V	D	G	H	K	I	S	W	Q	G	W	E	F	F	V	I	P	T	V	R	E	G	F	A	I	Y	D	I	H	F	K	G	.	.	.	.	R	S	V	V	Y	R	L	S	L	S	E	M	T	V	P	Y	G	D	P	R	A	P	F	H	R	K	Q	A	F	D	L	G	D	C	G	F	G	A	T	G
Template Known Secondary structure			S					T	T					T	T									T	T	T										T	T	.	.	.	.																B				S	T	T	G	G	G									T		T	T	T	T	B
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.		.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		S	P	I	A	R	G	K	D	A	P	S	N	A	V	L	L	N	E	T	I	A	D	Y	T	G	V	P	M	E	I	P	R	A	I	A	V	F	E	R	Y	A	G	P	E	Y	K	H	Q	E	M	G	Q	P	.	N	V	S	T	E	R	R	E	L	V	V	R	W	I	S	T	V	G	N	Y	D	Y	I	F	D	W
Query Conservation																																																							.
Alig confidence																																																							.																				.
Template Conservation																																																																											.
Template Sequence		N	S	L	A	L	G	C	D	C	L	G	V	I	K	Y	M	D	C	R	R	V	N	T	N	G	D	S	V	L	I	P	N	T	V	C	L	H	E	Q	D	G	G	L	L	Y	K	H	T	N	Y	R	T	N	V	P	V	I	A	R	R	R	E	F	V	V	Q	T	I	A	T	V	A	N	.	E	Y	M	L	N	I
Template Known Secondary structure				T	T	T	T	T		S		S	S											T	T	S																									T	T	T																						.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	H	E	N	G	T	I	G	I	D	A	G	A	T	G	I	E	A	V	K	G	V	K	A	K	T	M	H	D	E	T	A	K	D	D	T	R	Y	G	T	L	I	D	H	N	I	V	G	T	T	H	Q	H	I	Y	N	F	R	L	D	L	D	V	D	G	E	N	N	S	L	V	A	M	D	P	V	V	K	P
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.
Template Sequence		I	F	D	Q	A	G	E	I	R	I	H	V	R	A	T	G	I	L	S	T	M	P	L	D	K	.	.	.	.	.	.	.	.	D	V	T	V	P	W	G	T	N	V	G	P	R	V	M	A	A	Y	H	Q	H	M	L	S	F	R	I	D	P	A	V	D	G	Y	E	N	T	V	V	F	D	D	V	I	R	M	E
Template Known Secondary structure					T	T	S																			T	.	.	.	.	.	.	.	.	T				T	T						T	T																		T	T	S	S		B
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.									.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
		583	.		.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.		.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure				.																																												.
Query SS confidence				.																																												.
Query Sequence		N	T	.	A	G	G	P	R	T	S	T	M	Q	V	N	Q	Y	N	I	G	N	E	Q	D	A	A	Q	K	F	D	P	G	T	I	R	L	L	S	N	P	N	K	E	N	R	M	.	G	N	P	V	S	Y	Q	I	I	P	Y	A	G	G	T	H	P	V	A	K	G	A	Q	F	A	P	D	E	W	I	Y	H	R
Query Conservation				.																																												.
Alig confidence				.																																												.														.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.
Template Sequence		K	N	T	K	L	N	P	Y	N	V	G	F	V	T	E	R	T	V	V	E	K	P	G	Y	V	E	Q	S	P	F	T	N	R	S	Y	K	I	I	N	E	N	K	I	N	P	I	S	K	K	P	V	A	Y	K	I	M	M	P	A	R	.	.	.	.	.	.	Q	M	L	L	A	D	E	D	S	Y	N	N	K	R
Template Known Secondary structure		S	S		S	S		T	T	S												S	S							G	G	G	T													T	T	T		S												.	.	.	.	.	.					S		S	S	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.
Template SS confidence
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.							.	.	.	.	.	530	.	.	.	.	.	.	.	.
		661	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	F	M	D	K	Q	L	W	V	T	R	Y	H	P	G	E	R	F	P	E	G	K	Y	P	N	R	S	T	H	D	T	G	L	G	Q	Y	S	K	D	N	E	S	L	D	N	T	D	A	V	V	W	M	T	T	G	T	T	H	V	A	R	A	E	E	W	P	I	M	P	T	E	W	V	H	T	L	L	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	F	A	T	Q	Q	V	W	V	T	K	Y	R	D	N	E	L	Y	A	A	G	E	F	T	N	Q	S	Q	T	D	T	G	L	G	V	W	A	R	R	D	E	N	V	R	N	D	N	P	V	V	W	A	T	L	G	F	T	H	I	P	R	V	E	D	F	P	V	M	P	V	E	A	H	E	I	A	L	V	P
Template Known Secondary structure			G	G	G	G	S	S								T	T				T	T		S			T	T		S	S			S					T	T						T	T	B																G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
		741	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	N	F	F	D	E	T	P	T	L	G	A	L	K	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	F	F	D	K	N	P	A	L	S	V	P	Q	S	T
Template Known Secondary structure			S	S	S	S	S		G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		619	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.