Return to main results Retrieve Phyre Job Id

Job DescriptionP63177
Confidence100.00%DateThu Jan 5 12:07:51 GMT 2012
Rank11Aligned Residues146
% Identity18%Templated1mxia_
SCOP infoalpha/beta knot alpha/beta knot SpoU-like RNA 2'-O ribose methyltransferase
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   96...100.........110.........120.........130.........140.........150.........160.........170.....
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  FLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA
Query Conservation    



 
 

 


 
 


 
 
   


             


 

   
 
         
  
   
  
    
Alig confidence 














































































.
Template Conservation 
 


     
 


 
 


  

    

              

 
    
       
   
             .
Template Sequence  LDIVLYEPEIPQNTGNIIRLCANTGFRLHLIEPLGFTWDDKRLRRSGLDYHEFAEIKRHKTFEAFLESEKPKRLFALTT.
Template Known Secondary structure 
S


T
SS
SS
TT
TTS

GGGSSS
SS

S
T.
Template Predicted Secondary structure 































.
Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80
 
   176...180.........190.........200........ .210.........220.........230.........240...
Predicted Secondary structure 



















..












Query SS confidence 
































. .


































Query Sequence  GEADHTLYQSKMTGRLALVMGAEGEGMRRLTRE. . HCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS
Query Conservation        
          



 
  

    
 ..  
  
 

  
   






  
 


  


 
Alig confidence  .































..


































Template Conservation  .     
          



 
  


 
 
     
  
 

  
   




 
 

 


  

  
Template Sequence  . KGCPAHSQVKFKLGDYLMFGPETRGIPMSILNEMPMEQKIRIPMTANSRSMNLSNSVAVTVYEAWRQLG
Template Known Secondary structure  .T
SSBGGGS


TT

TTT
S
TTS
GGGB



TT




TT
Template Predicted Secondary structure  .

































Template SS confidence 





































































   81........90.........100.........110.........120.........130.........140.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions