Job Description P63177 Confidence 90.18% Date Thu Jan 5 12:07:51 GMT 2012 Rank 59 Aligned Residues 69 % Identity 20% Template c3mcaB_ PDB info PDB header:translation regulation/hydrolase Chain: B: PDB Molecule:protein dom34; PDBTitle: structure of the dom34-hbs1 complex and implications for its role in2 no-go decay Resolution 2.74 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.								.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																.	.	.	.	.	.	.																								.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.																								.	.	.	.	.
Query Sequence		M	I	Y	G	I	H	A	V	Q	A	L	L	E	R	A	P	E	R	F	Q	E	V	F	I	L	K	G	R	E	D	.	.	.	.	.	.	.	K	R	L	L	P	L	I	H	A	L	E	S	Q	G	V	V	I	Q	L	A	N	R	Q	.	.	.	.	.	Y	L	D	E	K	S	D	G	A	V	H	Q	G	I	I
Query Conservation																																.	.	.	.	.	.	.																								.	.	.	.	.
Alig confidence																	.	.														.	.	.	.	.	.	.																								.	.	.	.	.						.	.	.	.	.	.
Template Conservation																	.	.																																																						.	.	.	.	.	.
Template Sequence		A	W	Y	G	P	N	H	V	L	K	A	F	E	L	G	.	.	A	I	G	E	L	L	I	S	D	S	L	F	R	S	S	D	I	A	T	R	K	K	W	V	S	L	V	E	G	V	K	E	I	N	C	P	V	Y	I	F	S	S	L	H	E	S	G	K	Q	L	D	L	L	.	.	.	.	.	.	S	G	I	A
Template Known Secondary structure					S										T	T	.	.		B	S	S						T	T				S																		T	T								T	T	S									T	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																	.	.																																																						.	.	.	.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.							360	.	.	.
		72	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	V	K	P	G	R	Q	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	L	T	Y	P	V	D	E
Template Known Secondary structure				B	S	S
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions