Job Description P63177 Confidence 95.44% Date Thu Jan 5 12:07:51 GMT 2012 Rank 32 Aligned Residues 151 % Identity 13% Template c3kw2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable r-rna methyltransferase; PDBTitle: crystal structure of probable rrna-methyltransferase from2 porphyromonas gingivalis Resolution 2.00 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.									.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.																.	.
Query SS confidence																																							.	.	.	.	.	.	.	.																.	.
Query Sequence		A	S	L	D	Q	P	F	L	L	I	L	D	G	V	T	D	P	H	N	L	G	A	C	L	R	S	A	D	A	A	G	V	H	A	V	I	V	.	.	.	.	.	.	.	.	P	K	D	R	S	A	Q	L	N	A	T	A	K	K	V	.	.	A	C	G	A	A	E	S	V	P	L	I	R	V	T	N	L	A	R
Query Conservation																																							.	.	.	.	.	.	.	.																.	.
Alig confidence																																							.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		K	P	W	R	D	R	I	T	I	A	I	A	P	T	K	Q	S	E	R	X	E	W	X	L	E	K	L	V	E	I	G	V	D	E	V	V	F	I	E	S	E	H	S	E	R	R	R	I	K	A	E	R	L	E	R	I	A	I	S	A	X	K	Q	S	L	K	A	S	F	P	V	I	R	V	N	I	P	I	Q	T
Template Known Secondary structure			S	S		S										S	S																	S								T	T	S			S																		T	T		S	B
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		T	M	R	M	L	Q	E	E	N	I	W	I	V	G	T	A	G	E	A	D	H	T	L	Y	Q	.	.	.	.	S	K	M	T	G	R	L	A	L	V	M	G	A	E	G	E	G	M	R	R	L	T	R	E	H	C	D	E	L	I	S	I	P	M	A	G	S	V	S	S	L	N	V	S	V	A	T	G	I	C	L
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.																.
Template Conservation																																														.
Template Sequence		V	I	A	D	T	P	K	A	A	V	R	L	I	A	Y	V	D	E	A	V	R	G	R	G	Y	P	S	D	F	Y	H	V	G	Q	D	V	L	I	L	I	G	P	E	G	.	D	F	S	P	S	E	V	E	S	A	L	L	A	G	F	A	P	V	S	L	G	E	S	R	L	R	T	E	T	A	G	L	V	A	C
Template Known Secondary structure						S		T	T	S									T	T							G	G	G	T			T	T	S									T	T	.														T								S	S
Template Predicted Secondary structure																																														.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		236	.	.							.	240	.
Predicted Secondary structure					.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.
Query Sequence		F	E	A	.	.	.	.	.	.	V	R	Q
Query Conservation					.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.
Template Conservation
Template Sequence		Q	W	I	H	T	L	Q	A	C	Y	R	I
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions