Job Description P63177 Confidence 88.23% Date Thu Jan 5 12:07:51 GMT 2012 Rank 62 Aligned Residues 67 % Identity 16% Template c3ir9A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:peptide chain release factor subunit 1; PDBTitle: c-terminal domain of peptide chain release factor from2 methanosarcina mazei. Resolution 2.21 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.																																												.	.	.	.	.	.	40
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	Y	G	I	H	A	V	Q	A	L	L	E	R	A	P	E	R	F	Q	E	V	F	I	L	K	G	R	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	L	L	P	L	I
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		V	A	Y	G	E	S	Q	V	R	A	N	L	E	I	N	.	.	S	V	D	V	L	L	L	S	E	D	L	R	A	E	R	V	T	T	K	C	S	V	C	G	Y	E	N	K	W	T	R	R	W	K	P	P	A	P	A	A	G	N	C	P	K	C	G	S	S	L	E	V	T	D	V	T	D	I	V	D	E	F	S
Template Known Secondary structure					S									T	T	T	.	.									T	T											S	S	S	S																		B		T	T	T			B
Template Predicted Secondary structure																	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		41	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.						.
Query SS confidence															.	.	.	.	.						.
Query Sequence		H	A	L	E	S	Q	G	V	V	I	Q	L	A	.	.	.	.	.	N	R	Q	Y	L	.	D	E	K	S	D	G	A	V	H	Q	G	I	I	A	R	V	K	P	G	R
Query Conservation															.	.	.	.	.						.
Alig confidence															.	.	.	.	.						.				.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.
Template Sequence		E	L	A	D	K	S	N	A	K	V	V	F	V	S	T	D	F	D	E	G	S	Q	L	X	N	A	F	.	.	.	.	.	.	G	G	I	A	A	I	L	R	Y	N	T
Template Known Secondary structure							T	T								S		S									T	S	.	.	.	.	.	.	T	T						S	S
Template Predicted Secondary structure																													.	.	.	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.							.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions