Return to main results Retrieve Phyre Job Id

Job DescriptionP63177
Confidence64.60%DateThu Jan 5 12:07:51 GMT 2012
Rank76Aligned Residues125
% Identity12%Templatec3ib6B_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein from listeria2 monocytogenes serotype 4b
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.... .....60.........70.. .......80.........90.....
Predicted Secondary structure 




..........





........











Query SS confidence 




















. . . . . . . . . .

















. . . . . . . .






















Query Sequence  KRLLPLIHALESQGVVIQLAN. . . . . . . . . . RQYLDEKSDGAVHQGIIA. . . . . . . . RVKPGRQYQENDLPDLIASLDQP
Query Conservation       
        
 
  
 ..........   
  

    



 
........            
          
Alig confidence 




















..........

















........






















Template Conservation 
 
 
 
  

  
  
 
 

            
        

               

 
         
   
 
Template Sequence  KNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTE
Template Known Secondary structure  TTTT


SS

TT
GGG

TTSSSS


TT
T

GGG
Template Predicted Secondary structure 






























Template SS confidence 















































































   36...40.........50.........60.........70.........80.........90.........100.........110.....
 
   96...100.........110.........120.........130.........140.........150.........160......
Predicted Secondary structure 




















Query SS confidence 






































































Query Sequence  FLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQE
Query Conservation    



 
 

 


 
 


 
 
   


             


 

   
 
         
  
  
Alig confidence 










......


































..
















Template Conservation   
 



   
......
  
  


  
 
                
   
..       
   
     
Template Sequence  AVMVGNTFESD. . . . . . IIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVI. . PVWDLADVPEALLLLKK
Template Known Secondary structure  SBTTTT......TT


TTT
B
SS




SSS
..SSGGG
Template Predicted Secondary structure 


......
















..
Template SS confidence 






































































   116...120...... ...130.........140.........150.........160. ........170........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions