Job Description P63177 Confidence 77.99% Date Thu Jan 5 12:07:51 GMT 2012 Rank 69 Aligned Residues 67 % Identity 16% Template c2zkrf_ PDB info PDB header:ribosomal protein/rna Chain: F: PDB Molecule:rna expansion segment es7 part iii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																															.																						.
Query SS confidence																															.																						.
Query Sequence		M	I	Y	G	I	H	A	V	Q	A	L	L	E	R	A	P	E	R	F	Q	E	V	F	I	L	K	G	R	E	.	D	K	R	L	L	P	L	I	H	A	L	E	S	Q	G	V	V	I	Q	L	A	.	N	R	Q	Y	L	D	E	K	S	D	G	A	V	H	Q	G	I	I	A
Query Conservation																															.																						.
Alig confidence																	.	.													.																						.
Template Conservation																	.	.
Template Sequence		L	R	A	G	V	N	T	V	T	T	L	V	E	N	K	.	.	K	A	Q	L	V	V	I	A	H	D	V	D	P	I	E	L	V	V	F	L	P	A	L	C	R	K	M	G	V	P	Y	C	I	I	K	G	K	A	R	L	G	H	L	V	H	R	K	T	C	T	T	V	A	F
Template Known Secondary structure				B	S										T	T	.	.			S						S			S	S	S	T	T	T	T										T							S										T	S	S			S
Template Predicted Secondary structure																	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions