Job Description P63177 Confidence 97.16% Date Thu Jan 5 12:07:51 GMT 2012 Rank 22 Aligned Residues 116 % Identity 16% Template c2yy8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0106 protein ph0461; PDBTitle: crystal structure of archaeal trna-methylase for position2 56 (atrm56) from pyrococcus horikoshii, complexed with s-3 adenosyl-l-methionine Resolution 2.48 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.								.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.
Query Sequence		S	A	D	A	A	G	V	H	A	V	I	V	P	K	D	R	S	A	Q	L	N	A	T	A	K	K	V	A	C	G	A	A	E	S	V	P	L	I	R	V	T	N	L	A	R	T	M	R	M	L	Q	E	E	N	I	W	I	V	G	T	A	G	E	A	.	.	.	.	.	.	.	D	H	T	L	Y	Q	S	K	M
Query Conservation																																																																		.	.	.	.	.	.	.
Alig confidence																																																.	.	.																.	.	.	.	.	.	.
Template Conservation																																																.	.	.
Template Sequence		T	A	R	A	F	G	A	D	G	I	I	I	A	S	E	E	D	E	K	V	K	E	S	V	E	D	V	V	K	R	W	G	G	P	F	F	I	E	F	N	R	N	W	R	K	V	.	.	.	M	K	E	F	T	G	V	K	V	H	L	T	M	Y	G	L	H	V	D	D	V	I	E	E	L	K	E	K	L	K	K
Template Known Secondary structure						T	T		S					S	S	S																		S								S						.	.	.						S												G	G	G	T										T
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	R	L	A	L	V	M	G	A	E	G	E	G	M	R	R	L	T	R	E	H	C	D	E	L	I	S	I	P	M	A	G	S	V	S	S	L	N	V	S	V	A	T	G	I	C	L	F	E	A	V
Query Conservation
Alig confidence															.	.																				.	.	.	.
Template Conservation															.	.																				.	.	.	.
Template Sequence		G	E	D	F	M	I	I	V	G	A	E	K	V	.	.	P	R	E	V	Y	E	L	A	D	Y	N	V	A	I	G	N	Q	P	H	.	.	.	.	S	E	V	A	A	L	A	V	L	L	D	R	L	L
Template Known Secondary structure		T									S	S			.	.									S					S	S	S	S			.	.	.	.
Template Predicted Secondary structure															.	.																				.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions