Job Description P63177 Confidence 93.00% Date Thu Jan 5 12:07:51 GMT 2012 Rank 53 Aligned Residues 72 % Identity 19% Template c2vgmA_ PDB info PDB header:cell cycle Chain: A: PDB Molecule:dom34; PDBTitle: structure of yeast dom34 : a protein related to translation2 termination factor erf1 and involved in no-go decay. Resolution 2.6 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																														.	.	.	.	.	.	.																									.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.																									.	.	.	.	.
Query Sequence		M	I	Y	G	I	H	A	V	Q	A	L	L	E	R	A	P	E	R	F	Q	E	V	F	I	L	K	G	R	.	.	.	.	.	.	.	E	D	K	R	L	L	P	L	I	H	A	L	E	S	Q	G	V	V	I	Q	L	A	N	R	.	.	.	.	.	Q	Y	L	D	E	K	S	D	G	A	V	H	Q	G	I	I
Query Conservation																														.	.	.	.	.	.	.																									.	.	.	.	.
Alig confidence																	.	.												.	.	.	.	.	.	.																									.	.	.	.	.							.	.	.	.	.	.
Template Conservation																	.	.																																																						.	.	.	.	.	.
Template Sequence		A	W	Y	G	E	K	E	V	V	K	A	A	E	Y	G	.	.	A	I	S	Y	L	L	L	T	D	K	V	L	H	S	D	N	I	A	Q	R	E	E	Y	L	K	L	M	D	S	V	E	S	N	G	G	K	A	L	V	L	S	T	L	H	S	L	G	E	E	L	D	Q	L	.	.	.	.	.	.	T	G	I	A
Template Known Secondary structure					S										T	T	.	.													T		S		T	T														T	T	T								T	T	S								T	T	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																	.	.																																																						.	.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.							.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	V	K	P	G	R	Q	Y	Q	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	I	L	K	Y	P	L	P	D	L	D	E
Template Known Secondary structure					S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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