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Job DescriptionP63177
Confidence100.00%DateThu Jan 5 12:07:51 GMT 2012
Rank10Aligned Residues153
% Identity23%Templatec2ha8A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:tar (hiv-1) rna loop binding protein; PDBTitle: methyltransferase domain of human tar (hiv-1) rna binding2 protein 1
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.........130.........140.........150..... ....160......
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Query Sequence  IASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVT. . NLARTMRMLQE
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Template Sequence  LGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGS. LQCISDKQFQHLSVSAEQWLPLVEVKPPQLIDYLQQKKT
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.GGGGGSTTGGGTS


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   167..170......... 180.........190.........200.........210.........220.........230.........240..
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Query Sequence  ENIWIVGTAGEAD. HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR
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Template Sequence  EGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ
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   99100.........110.........120.........130.........140.........150.........160.........170.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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