Job Description P63177 Confidence 100.00% Date Thu Jan 5 12:07:51 GMT 2012 Rank 3 Aligned Residues 222 % Identity 27% Template c1x7pB_ PDB info PDB header:transferase Chain: B: PDB Molecule:rrna methyltransferase; PDBTitle: crystal structure of the spou methyltransferase avirb from2 streptomyces viridochromogenes in complex with the cofactor adomet Resolution 2.55 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	Y	G	I	H	A	V	Q	A	L	L	E	R	A	P	E	R	F	Q	E	V	F	I	L	K	G	R	E	D	K	R	L	L	P	L	I	H	A	L	E	S	Q	G	V	V	I	Q	L	A	N	R	Q	Y	L	D	E	K	S	D	G	A	V	H	Q	G	I	I	A	R	V	K	P	G	R	Q	Y	Q	E	N
Query Conservation
Alig confidence																			.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	M	G	V	R	P	I	S	L	A	V	E	H	G	W	P	.	V	R	T	L	L	Y	D	R	E	L	S	K	W	A	R	E	L	L	.	.	.	.	.	.	.	.	.	.	.	R	T	V	R	T	E	Q	I	A	M	A	P	D	L	L	M	P	P	E	V	V	A	V	V	E	M	P	A	D	D	L	D	R
Template Known Secondary structure					S										T	T			.							.												.	.	.	.	.	.	.	.	.	.	.	T	T	S		S							T	G	G	G				S												G	G	G
Template Predicted Secondary structure																			.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.												.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	P	D	L	I	A	S	L	D	Q	P	F	L	L	I	L	D	G	V	T	D	P	H	N	L	G	A	C	L	R	S	A	D	A	A	G	V	H	A	V	I	V	P	K	D	R	S	A	Q	L	N	A	T	A	K	K	V	A	C	G	A	A	E	S	V	P	L	I	R	V	T	N	L	A	R	T	M	R	M
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	I	P	V	R	E	D	F	L	G	V	L	F	D	R	P	T	S	P	G	N	I	G	S	I	I	R	S	A	D	A	L	G	A	H	G	L	I	V	A	G	H	A	A	D	V	Y	D	P	K	S	V	R	S	S	T	G	S	L	F	S	L	P	A	V	R	V	P	S	P	G	E	V	M	D	W
Template Known Secondary structure		.	.	.	.	.	S				T	T								S																	T	T								S	S				T	T	S								T	T	G	G	G	T	S						S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		164	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.
Query SS confidence						.	.	.	.	.
Query Sequence		L	Q	E	E	.	.	.	.	.	N	I	W	I	V	G	T	A	G	E	A	D	H	T	L	Y	Q	S	K	M	T	G	R	L	A	L	V	M	G	A	E	G	E	G	M	R	R	L	T	R	E	H	C	D	E	L	I	S	I	P	M	A	G	S	V	S	S	L	N	V	S	V	A	T	G	I	C	L	F	E	A
Query Conservation						.	.	.	.	.
Alig confidence						.	.	.	.	.
Template Conservation
Template Sequence		V	E	A	R	R	A	A	G	T	P	I	V	L	V	G	T	D	E	H	G	D	C	D	V	F	D	F	D	F	T	Q	P	T	L	L	L	I	G	N	E	T	A	G	L	S	N	A	W	R	T	L	C	D	Y	T	V	S	I	P	M	A	G	S	A	S	S	L	N	A	A	N	A	A	T	A	I	L	Y	E	A
Template Known Secondary structure								T	T										T	T		S			G	G	G	S		T	T	S									S	S	S		S									S								S		S	S
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		239	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	Q	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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