Job Description P37443 Confidence 98.74% Date Thu Jan 5 11:55:38 GMT 2012 Rank 65 Aligned Residues 204 % Identity 16% Template d1xtoa_ SCOP info Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase Coenzyme PQQ synthesis protein B, PqqB Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		501	.	.	.	.	.	.	.	.																													510	.	.	.	.	.	.	.	.	.	520		.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																										.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																										.	.	.	.	.	.
Query Sequence		L	Y	M	L	D	V	G	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	M	V	I	A	R	N	G	K	A	.	I	L	Y	D	T	G	L	A	W	P	E	G	D	S	G	Q	Q	L	I	I	P	W	L	H	W	.	.	.	.	.	.
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																										.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.							.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.
Template Sequence		I	Q	V	L	G	S	A	A	G	G	G	F	P	Q	W	N	C	N	C	V	N	C	K	G	Y	R	D	G	T	L	K	A	T	A	R	T	Q	S	S	I	A	L	S	D	D	G	V	H	W	I	L	C	N	A	S	.	.	.	.	.	.	.	.	.	P	D	I	R	A	Q	L	Q	A	F	A	P	X	Q	P	A
Template Known Secondary structure								B		T	T		B	S		T	T			S								T	T		S					B		B							S	S	S	S	S					S			.	.	.	.	.	.	.	.	.	T	T							T		G	G	G
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.										.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
					546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.																							.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Predicted Secondary structure		.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	H	N	L	E	P	E	G	V	I	L	S	H	E	H	L	D	H	R	G	G	L	D	S	I	L	H	I	W	P	M	L	W	I	R	S	P	L	N	W	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	H	Q	P	C	V	R	G	E	A	W	Q	W	Q	G
Query Conservation		.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	L	R	D	T	G	I	N	A	I	V	L	L	D	S	Q	I	D	H	T	T	G	L	L	S	L	R	E	G	C	P	H	Q	V	W	C	T	D	X	V	H	Q	D	L	T	T	G	F	P	L	F	N	X	L	S	H	W	N	G	G	L	Q	W	N	R	I	E	L	E	G	S	F	V	I	D	A	C	P	N
Template Known Secondary structure		S	S	S	S			S							S								G	G	G	G	G	G	G	G	G															T	T	T	T	S							T	T	S	T	T									S	S	S		B			T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		601	.	.	.	.	.	.										.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	F	S	A	H	W	.	.	.	.	.	.	.	.	.	P	L	Q	G	S	N	D	K	G	N	N	H	S	C	V	V	K	V	D	D	G	T	N	S	I	L	L	T	G	D	I	E	A	P	A	E	Q	K	M	L	S	R	Y	W	Q	Q	V	Q	A	T	L	L	Q	V	.	.	.	.	.	.	.	.	.	.
Query Conservation									.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.																																												.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		L	K	F	T	P	F	P	L	R	S	A	A	P	P	Y	S	P	H	R	F	D	P	H	P	G	D	N	L	G	L	X	V	E	D	T	R	T	G	G	K	L	F	Y	A	P	G	L	G	Q	V	D	E	K	L	L	A	X	X	H	.	.	.	.	G	A	D	C	L	L	V	D	G	T	L	W	E	D	D	E	X
Template Known Secondary structure															T	T	S	T	T	T	T	S			T	T	S	S								T	T	T								S			S											T	.	.	.	.	T		S									S	S	T	T
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
															662	.	.		.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.		.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.				.																							.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.				.																							.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	H	.	G	S	N	T	S	S	S	L	P	L	I	Q	R	V	N	G	K	V	A	L	A	S	.	A	S	R	Y	N	A	W	R	L	P	S	N	K	V	K	H	R	Y	Q	L	Q	G	Y	Q	W	I	D	T	P	H	Q	G	Q	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.				.																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.				.																							.																							.	.	.
Template Conservation																																																																.	.	.
Template Sequence		Q	R	R	G	V	G	T	R	T	G	R	E	X	G	H	L	A	Q	N	G	P	G	G	X	L	E	V	L	D	G	F	P	R	Q	R	K	V	L	I	H	I	N	N	T	N	P	I	L	D	E	N	S	P	E	R	A	E	V	L	R	R	G	.	.	.	V	E	V	A	F	D	G	X	S
Template Known Secondary structure					T	S		S			S	S	S	S	S				S	S	S	S	S	S					G	G	G			S	S						S	B		T	T		G	G	G	S	T	T										T	T	.	.	.						T	T
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions