Job Description P37443 Confidence 99.39% Date Thu Jan 5 11:55:38 GMT 2012 Rank 13 Aligned Residues 199 % Identity 17% Template c3zq4C_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:ribonuclease j 1; PDBTitle: unusual, dual endo- and exo-nuclease activity in the degradosome2 explained by crystal structure analysis of rnase j1 Resolution 3.00 Å

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		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.		.	.	.	.	.	.	540	.				.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
Predicted Secondary structure																											.									.	.	.																																									.	.	.
Query SS confidence																											.									.	.	.																																									.	.	.
Query Sequence		G	L	A	M	V	I	A	R	N	G	K	A	I	L	Y	D	T	G	L	A	W	P	E	G	D	.	S	G	Q	Q	L	I	I	P	.	.	.	W	L	H	W	H	N	L	E	P	E	G	V	I	L	S	H	E	H	L	D	H	R	G	G	L	D	S	I	L	H	I	W	P	M	L	W	I	R	S	P	.	.	.
Query Conservation																											.									.	.	.																																									.	.	.
Alig confidence																											.									.	.	.																																			.						.	.	.
Template Conservation																																																																									.
Template Sequence		K	N	T	Y	A	V	Q	F	Q	D	E	I	V	L	I	D	A	G	I	K	F	P	E	D	E	L	L	G	I	D	Y	V	I	P	D	Y	T	Y	L	V	K	N	E	D	K	I	K	G	L	F	I	T	H	G	H	E	D	H	I	G	G	I	P	Y	L	L	R	Q	V	N	I	.	P	V	Y	G	G	K	L	A
Template Known Secondary structure										T	T										B				T	T	S	T	T		S											T	T	G	G	G							S								T	T						T	T				.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100
															582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.								.	.	640	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	W	E	H	H	Q	P	C	V	R	G	E	A	W	Q	W	Q	G	L	R	F	S	A	H	W	P	L	Q	G	S	N	D	K	G	N	N	H	S	C	V	V	K	V	D	D	G	T	N	S	I	L	L	T	G	D	.	.	.	.	.	.	.	I	E	A	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		I	G	L	L	R	N	K	L	E	E	H	G	L	L	R	Q	T	K	L	N	I	I	G	E	D	D	I	V	K	F	R	K	T	A	V	S	F	F	R	T	T	H	S	I	.	.	.	.	.	P	D	S	Y	G	I	V	V	K	T	P	P	G	N	I	V	H	T	G	D	F	K	F	D	F	T	P	V	G	E	P
Template Known Secondary structure													S	T	T	T	T	S							T	T						T	T									B		S	S	.	.	.	.	.	S	S									T	T								S		B			S	S		S	S	S
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660					.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.							.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.
Predicted Secondary structure																					.	.	.	.																			.	.	.	.	.	.
Query SS confidence																					.	.	.	.																			.	.	.	.	.	.
Query Sequence		A	E	Q	K	M	L	S	R	Y	W	Q	Q	V	Q	A	T	L	L	Q	.	.	.	.	V	P	H	H	G	S	N	T	S	S	S	L	P	L	I	Q	R	V	.	.	.	.	.	.	N	G	K	V	A	L	A	S	A	S	R	Y	N	A	W	R	L	P	S	N	K	V	K	H	R	Y	Q	L	Q	G	Y	Q	W
Query Conservation																					.	.	.	.																			.	.	.	.	.	.
Alig confidence														.							.	.	.	.																			.	.	.	.	.	.															.	.
Template Conservation														.																																																	.	.
Template Sequence		A	N	L	T	K	M	A	E	I	G	K	E	.	G	V	L	C	L	L	S	D	S	T	N	S	E	N	P	E	F	T	M	S	E	R	R	V	G	E	S	I	H	D	I	F	R	K	V	D	G	R	I	I	F	A	T	F	A	S	N	I	.	.	H	R	L	Q	Q	V	I	E	A	A	V	Q	N	G	R	K	V
Template Known Secondary structure													T	.										T	T	T	T			S																					S								T	T			.	.												T	T	T
Template Predicted Secondary structure														.																																																	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		712	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	T	P	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	F	G	R
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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