Job Description P37443 Confidence 98.72% Date Thu Jan 5 11:55:38 GMT 2012 Rank 66 Aligned Residues 155 % Identity 20% Template c3spuB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-lactamase ndm-1; PDBTitle: apo ndm-1 crystal structure Resolution 2.10 Å

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		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		A	M	V	I	A	R	N	G	K	A	I	L	Y	D	T	G	L	A	W	P	E	G	D	S	G	Q	Q	L	I	I	P	W	L	H	W	H	N	L	E	P	E	G	V	I	L	S	H	E	H	L	D	H	R	G	G	L	D	S	I	L	H	I	W	P	M	L	W	I	R	S	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.																																												.								.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.																																												.
Template Sequence		G	L	I	V	R	D	G	G	R	V	L	V	V	D	T	A	.	.	.	W	T	D	D	Q	T	A	Q	I	L	N	W	I	K	Q	E	I	N	L	P	V	A	L	A	V	V	T	H	A	H	Q	D	K	M	G	G	M	D	A	L	H	A	A	.	G	I	A	T	Y	A	N	A	L	S	N	Q	L	A	P	Q	E
Template Known Secondary structure								T	T									.	.	.	S	S															T											S	S	S					T	T							T	.	T													G	G	G	G
Template Predicted Secondary structure																		.	.	.																																												.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
							581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.																	.
Predicted Secondary structure		.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	P	L	N	W	E	H	H	Q	P	C	V	R	G	E	A	W	Q	W	Q	G	L	R	F	S	A	H	W	P	L	Q	G	S	N	D	K	G	N	N	H	S	C	V	V	K	V	D	D	G	T	N	S	I	L	L	T	G	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E
Query Conservation		.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																					.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.
Template Sequence		G	M	V	A	A	Q	H	S	L	T	F	A	A	N	G	W	V	E	P	A	T	A	P	N	F	G	P	L	K	V	F	Y	P	G	P	G	H	T	S	D	N	.	.	.	.	.	.	I	T	V	G	I	D	G	T	D	I	A	F	G	G	C	L	I	K	D	S	K	A	K	S	L	G	N	L	G	D	A	D	T
Template Known Secondary structure		T					S					B		T	T	S	B	B		G	G	G	S	T	T		T	T								S	S	S	S	S	S		.	.	.	.	.	.						T	T	S	S					T	T	T				T	T		S						T	T			T
Template Predicted Secondary structure																																											.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	A	E	Q	K	M	L	S	R	Y	W	Q	Q	V	Q	A	T	L	L	Q	V	P	H	H	G	S	N	T	S	S	S	L	P	L	I	Q	R	V
Query Conservation
Alig confidence																						.										.	.
Template Conservation																						.										.	.
Template Sequence		E	H	Y	A	A	S	A	R	A	F	G	A	A	F	P	K	A	S	M	I	.	V	M	S	H	S	A	P	D	S	.	.	R	A	A	I	T	H	T
Template Known Secondary structure		T	T												S	T	T					.			T	T						.	.	T
Template Predicted Secondary structure																						.										.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions