 |
Job Description | P37443 | Confidence | 51.77% | Date | Thu Jan 5 11:55:38 GMT 2012 |
Rank | 121 | Aligned Residues | 77 |
% Identity | 12% | Template | c3p94A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:gdsl-like lipase; |
PDBTitle: crystal structure of a gdsl-like lipase (bdi_0976) from2 parabacteroides distasonis atcc 8503 at 1.93 a resolution
|
Resolution | 1.93 Å |
|
 |
  |   |
628 | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | |
|
|
|
. | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | T | N | S | I | L | L | T | G | D | I | E | A | P | A | E | Q | K | M | L | S | R | Y | W | Q | Q | V | Q | A | T | L | L | Q | V | P | H | H | G | S | N | T | S | S | S | L | P | L | I | Q | . |
. |
. |
. |
R | V | N | G | K | V | A | L | A | S | A | S | R | Y | N | A | W | R | L | P | S | N | K | V | K | H | R |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|
|
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|
|
|
|   |
|
|
|
|   |   |
|
|   | . | . | . | . |   |
|   |
|   |   |
|
|
|
|   |
|   |   |
|
|
|
|
|
|   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |
|   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | P | S | N | V | V | F | X | G | N | S | I | T | D | G | W | W | P | A | D | S | T | F | F | I | . |
. |
R | N | N | F | V | D | R | G | I | S | G | Q | T | T | S | E | X | L | V | R | F | R | Q | D | V | I | N | L | K | P | K | A | V | V | I | L | A | G | I | N | D | I | A | H | N | N | G | V | I | A | L | E | N |
Template Known Secondary structure |   |
S | S |  |  |  |  |  |  |  | S |  |  |  |  | T |  |  |  |  |
| T | T |  |  |  | . | . |  |  | T |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | G | G | G |
|  |  |  |  |  |  |  |
|
|  |  |  |  | T | T | T | T | S |
|
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
  |
  |   |
704 | . | . |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
Y | Q | L |
Query Conservation |   |
|   |   |
Alig confidence |   |
|
|
|
Template Conservation |   |
  |   |   |
Template Sequence |   |
V | F | G |
Template Known Secondary structure |   |
 |  |  |
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
122 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|