Job Description P37443 Confidence 98.84% Date Thu Jan 5 11:55:38 GMT 2012 Rank 60 Aligned Residues 198 % Identity 16% Template c3md7A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase-like; PDBTitle: crystal structure of a beta-lactamase-like protein bound to gmp from2 brucella melitensis Resolution 1.27 Å

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		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.																									510	.	.	.	.	.	.						.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Query Sequence		R	P	D	E	W	Q	L	Y	M	L	D	V	G	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	M	V	I	A	R	.	.	.	.	.	N	G	K	A	I	L	Y	D	T	G	L	A	W	P	E	G	D	S	G	Q	Q	L	I	I	P	W	L	H	W
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	N	C	L	R	F	T	L	L	G	C	G	S	S	P	G	V	P	R	I	N	G	D	W	G	K	C	D	P	K	N	P	K	N	R	R	R	R	A	S	L	L	V	E	R	Y	D	A	E	G	N	N	T	V	V	V	I	D	T	G	P	D	.	.	.	.	.	.	.	.	.	.	F	R	M	Q	M	I	D
Template Known Secondary structure				S										B		T	T		B	S		T	T				T	T	S		T	T		G	G	G		B		B										T	T												T	T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.											.	.	.	70	.	.	.
		546	.	.	.	550		.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.					.	.	.	.	.	.	580	.																								.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Predicted Secondary structure							.																								.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.																								.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	N	L	E	P	.	E	G	V	I	L	S	H	E	H	L	D	H	R	G	G	L	D	S	I	L	H	I	W	.	.	.	.	P	M	L	W	I	R	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	W	E	H	H	Q	P	C	V	R	G	E	A	W	Q
Query Conservation							.																								.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																								.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	V	H	M	L	D	A	A	V	Y	T	H	P	H	A	D	H	I	H	G	I	D	D	L	R	T	Y	V	V	D	N	G	R	L	M	D	V	Y	A	N	R	L	T	R	N	R	L	Y	D	T	F	G	Y	C	F	E	T	P	V	G	S	S	Y	P	P	I	L	S	M	H	D	I	A	P	E	T	P	F	S
Template Known Secondary structure			T					S					S								T	T	G	G	G	G								T	S																			G	G	G	T	S			T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		598					.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.			640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
Predicted Secondary structure			.	.	.	.																																										.	.
Query SS confidence			.	.	.	.																																										.	.
Query Sequence		W	.	.	.	.	Q	G	L	R	F	S	A	H	W	P	L	Q	G	S	N	D	K	G	N	N	H	S	C	V	V	K	V	D	D	G	T	N	S	I	L	L	T	G	D	I	E	.	.	A	P	A	E	Q	K	M	L	S	R	Y	W	Q	Q	V	Q	A	T	L	L	Q	V	P	H	H	G	S	N	T	S	S	S
Query Conservation			.	.	.	.																																										.	.
Alig confidence			.	.	.	.									.	.	.	.	.	.	.	.	.																									.	.												.
Template Conservation															.	.	.	.	.	.	.	.	.																																						.
Template Sequence		I	E	G	A	G	G	A	I	R	F	E	P	F	.	.	.	.	.	.	.	.	.	S	Q	V	H	G	D	I	E	S	L	G	F	R	I	G	S	V	V	Y	C	T	D	V	S	A	F	P	E	Q	S	L	Q	Y	I	K	D	A	.	D	V	L	I	I	G	A	L	Q	Y	R	P	H	P	S	H	F	S	L	G
Template Known Secondary structure					T	T									.	.	.	.	.	.	.	.	.					T	T									T	T						S		S	B			G	G	G					T	T		.	S									S	S		B	T	T	B
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.																																						.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		672	.			.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		L	P	.	.	L	I	Q	R	V	N	G	K	V	A	L	A	S	A	S	R	Y	N	A	W	R	L	P	S	N	K	V	K	H	R	Y	Q	L	Q	G	Y	Q	W	I	D	T	P	H	Q	G	Q
Query Conservation				.	.
Alig confidence				.	.														.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.
Template Sequence		E	A	L	E	W	I	E	K	L	S	P	K	R	A	I	L	T	.	.	.	.	.	.	.	H	M	H	V	P	L	D	Y	E	T	V	M	R	E	T	P	H	H	V	E	P	G	Y	D	G	L
Template Known Secondary structure													S						.	.	.	.	.	.	.	S	B		T	T										S		T	T						T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240								.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions