Job Description P37443 Confidence 22.63% Date Thu Jan 5 11:55:38 GMT 2012 Rank 192 Aligned Residues 204 % Identity 11% Template c3ivdA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nucleotidase; PDBTitle: putative 5'-nucleotidase (c4898) from escherichia coli in2 complex with uridine Resolution 1.90 Å

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		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.					.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.								.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.																																						.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.																																						.	.	.	.	.	.	.
Query Sequence		N	G	K	A	I	L	Y	D	T	G	L	A	W	P	E	G	D	S	G	Q	Q	.	.	.	.	L	I	I	P	W	L	H	W	H	N	L	E	P	E	G	V	I	L	S	H	E	H	L	D	H	R	G	G	L	D	S	I	L	H	I	W	P	.	.	.	.	.	.	.	M	L	W	I	R	S	P	L	N	W	E
Query Conservation																							.	.	.	.																																						.	.	.	.	.	.	.
Alig confidence																							.	.	.	.												.	.													.	.											.	.	.	.	.	.	.										.
Template Conservation																																						.	.													.	.																											.
Template Sequence		N	K	A	T	W	F	F	D	A	G	D	Y	F	T	G	P	Y	I	S	S	L	T	K	G	K	A	I	I	D	I	X	N	T	X	P	F	.	.	D	A	V	T	I	G	N	H	E	F	D	H	.	.	G	W	D	N	T	L	L	Q	L	S	Q	A	K	F	P	I	V	Q	G	N	I	F	Y	Q	N	S	.	S
Template Known Secondary structure			S	S							S			S	S	S	S					T	T	T	T								T	T	S			.	.	S						G	G	G	G	T	T	.	.										T	T		S	S		B				S				T	T	S	.	S
Template Predicted Secondary structure																																						.	.													.	.																											.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.
		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.						.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		H	H	Q	P	C	V	R	G	E	A	W	Q	W	Q	G	L	R	F	S	A	H	W	.	.	.	.	.	P	L	Q	G	S	N	D	K	G	N	N	H	S	C	V	V	K	V	D	D	G	T	N	S	I	L	L	T	G	D	I	E	A	P	A	E	Q	K	M	L	S	R	Y	W	Q	Q	V	Q	A	T	L	L	Q
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		K	S	F	W	D	K	P	Y	T	I	I	E	K	D	G	V	K	I	G	V	I	G	L	H	G	V	F	A	F	N	D	T	V	S	A	A	T	R	V	G	I	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	E	I	K	W	L	Q	R	Y	I	D	E	L	K	G	K	V	D	L	.	T	V	A
Template Known Secondary structure			B	S	S	S		S							T	T																		S		G	G	G	S	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.															T	T	T		S		.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.														.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.
		661	.	.	.	.	.	.	.	.	670	.														.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.					.	.	720	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.
Query Sequence		V	P	H	H	G	S	N	T	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	L	I	Q	R	V	N	G	K	V	A	L	A	S	A	S	R	Y	N	A	W	R	L	P	S	N	K	V	K	H	R	Y	Q	L	Q	G	Y	Q	W	I	D	T	P	H	Q	.	.	.	.	G	Q	T	T	V	N
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.																								.	.	.	.
Template Conservation																																											.	.	.	.	.	.
Template Sequence		L	I	H	E	G	V	P	A	R	Q	S	S	X	G	G	T	D	V	R	R	A	L	D	K	D	I	Q	T	A	S	Q	V	K	G	L	D	I	L	I	T	G	.	.	.	.	.	.	H	A	H	V	G	T	P	E	P	I	K	V	G	N	T	L	I	L	S	T	D	S	G	G	I	D	V	G	K	L	V	L	D
Template Known Secondary structure						S	S						S	S	G	G	G	S	S															S	S								.	.	.	.	.	.	S	S					S	S					T	T								S	T	T	S
Template Predicted Secondary structure																																											.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250							.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		724	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	A	Q	G	W	R	I	S	S	L	R	E	Q	I	L	P	R	W	Y	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	K	E	K	P	H	N	F	T	V	K	N	F	E	L	K	T	I	Y	A	D	E
Template Known Secondary structure				T	T	T	T													B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions