Return to main results Retrieve Phyre Job Id

Job DescriptionP37443
Confidence98.94%DateThu Jan 5 11:55:38 GMT 2012
Rank53Aligned Residues154
% Identity22%Templatec3hnnD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:putative diflavin flavoprotein a 5; PDBTitle: crystal structure of putative diflavin flavoprotein a 5 (fragment 1-2 254) from nostoc sp. pcc 7120, northeast structural genomics3 consortium target nsr435a
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   511........520.........530.........540....... ..550 .........560.........570.........580
Predicted Secondary structure 













.


.











........
Query SS confidence 




































.


.





























. . . . . . . .
Query Sequence  AMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHN. LEP. EGVILSHEHLDHRGGLDSILHIWPMLWIRS. . . . . . . .
Query Conservation 



       





           
 
 
   
.
  .
 




 
 

 

   
     
  
  ........
Alig confidence 







.










.....











.


.





























........
Template Conservation 



    . 





    .....    
  
        
  

 

 
 

 


  
        
          
Template Sequence  SYVIEGDK. TAIIDPPVESF. . . . . XKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLELAPQITFVCSLPAAGDL
Template Known Secondary structure  SSS.



GGG.....S
GGG


SS

GGG
TT
Template Predicted Secondary structure 


.



.....
















Template SS confidence 















































































   45....50.. .......60... ......70.........80.........90.........100.........110........
 
   581........590......... 600.........610.........620.........630........
Predicted Secondary structure  ....














.


















.................
Query SS confidence  . . . .


















.






































. . . . . . . . . . . . . . . . .
Query Sequence  . . . . PLNWEHHQPCVRGEAWQWQ. GLRFSAHWPLQGSNDKGNNHSCVVKVDDGTNSILLTGDI. . . . . . . . . . . . . . . . .
Query Conservation  ....            
      .     

 
        
  
 

         





.................
Alig confidence  ....


















.












....








..










.................
Template Conservation                                   

  ....         ..    





                  
Template Sequence  RAAFPDDNLNILPXRGKETLDLGKGHVLKFLPIPSPR. . . . WPAGLCTYD. . VQTQILYTDKIFGAHICGDDVFDDNWES
Template Known Secondary structure  SSSS



SS

STT



SS....
TT
..TTTTTTT





S
SBSSS
TT
Template Predicted Secondary structure 





















....



..























Template SS confidence 















































































   119120.........130.........140.........150..... ....160.... .....170.........180.........190..
 
   639640.........650.........660.........670.......
Predicted Secondary structure  ...............
















Query SS confidence  . . . . . . . . . . . . . . .






































Query Sequence  . . . . . . . . . . . . . . . EAPAEQKMLSRYWQQVQATLLQVPHHGSNTSSSLPLIQR
Query Conservation  ...............    
  

      
  




 



 



  

  
Alig confidence  ...............











.

























Template Conservation                        

  
.  
    
 



 
 
         
Template Sequence  FKEDQRYYFNCLXAPHAIHVEAALEKI. SDLQVRLYAVGHGPLVRTSLIALTQA
Template Known Secondary structure  TTGGGT.TT


SSSSSBBSSS
Template Predicted Secondary structure 








.













Template SS confidence 





















































   193......200.........210......... 220.........230.........240.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions