Job Description P37443 Confidence 27.64% Date Thu Jan 5 11:55:38 GMT 2012 Rank 176 Aligned Residues 103 % Identity 16% Template c3fzyA_ PDB info PDB header:toxin Chain: A: PDB Molecule:rtx toxin rtxa; PDBTitle: crystal structure of pre-cleavage form of cysteine protease domain2 from vibrio cholerae rtxa toxin Resolution 1.95 Å

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		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.										670	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Query Sequence		N	H	S	C	V	V	K	V	D	D	G	T	N	S	I	L	L	T	G	D	I	E	A	P	A	E	Q	K	M	L	S	R	Y	W	Q	Q	V	Q	A	T	L	L	Q	V	P	H	H	G	S	N	T	S	.	.	.	.	.	.	.	.	.	S	S	L	P	L	I	Q	R	V	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	S	V	V	V	Q	L	D	S	D	G	N	Y	R	V	V	Y	G	D	P	S	K	L	.	.	.	.	.	.	.	.	.	.	.	D	G	K	L	R	W	Q	L	V	G	H	G	R	D	H	S	E	T	N	N	T	R	L	S	G	Y	S	A	D	E	L	A	V	K	L	A	K	F	Q	Q	S	F	N	Q	A
Template Known Secondary structure		G	G								T	T	S							S		G	G	G		.	.	.	.	.	.	.	.	.	.	.		S	S											S			T	T	S					T	T	B
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3485	.	.	.	.	3490	.	.	.	.	.	.	.	.	.	3500	.	.	.	.	.	.	.	.												.	3510	.	.	.	.	.	.	.	.	.	3520	.	.	.	.	.	.	.	.	.	3530	.	.	.	.	.	.	.	.	.	3540	.	.	.	.	.	.	.	.	.	3550	.	.	.
							679	680	.	.	.	.	.				.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.
Predicted Secondary structure		.	.	.	.	.								.	.	.
Query SS confidence		.	.	.	.	.								.	.	.
Query Sequence		.	.	.	.	.	N	G	K	V	A	L	A	.	.	.	S	A	S	R	Y	N	A	W	R	L	P	S	N	K	V	K	H	R	Y	Q	L	Q	G	Y	Q	W	I	D	T	P	H	Q	G	Q	T	T	V	N	F	S	A	Q	G	W	R	I
Query Conservation		.	.	.	.	.								.	.	.
Alig confidence		.	.	.	.	.								.	.	.
Template Conservation
Template Sequence		E	N	I	N	N	K	P	D	H	I	S	I	V	G	S	S	L	V	S	D	D	K	Q	K	G	F	G	H	Q	F	I	N	A	M	D	A	N	G	L	R	V	D	V	S	V	R	S	S	E	L	A	V	D	E	A	G	R	K	H	T	K
Template Known Secondary structure			T						S						S	S	S		S		T	T	S	S	S	S												T	T									S	S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		3554	.	.	.	.	.	3560	.	.	.	.	.	.	.	.	.	3570	.	.	.	.	.	.	.	.	.	3580	.	.	.	.	.	.	.	.	.	3590	.	.	.	.	.	.	.	.	.	3600	.	.	.	.	.	.	.	.	.	3610	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions