Job Description P37443 Confidence 99.11% Date Thu Jan 5 11:55:38 GMT 2012 Rank 37 Aligned Residues 141 % Identity 13% Template c2q9uB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:a-type flavoprotein; PDBTitle: crystal structure of the flavodiiron protein from giardia2 intestinalis Resolution 1.90 Å

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		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550		.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
Predicted Secondary structure																																										.																															.	.	.	.	.	.	.	.	.
Query SS confidence																																										.																															.	.	.	.	.	.	.	.	.
Query Sequence		A	M	V	I	A	R	N	G	K	A	I	L	Y	D	T	G	L	A	W	P	E	G	D	S	G	Q	Q	L	I	I	P	W	L	H	W	H	N	L	E	P	.	E	G	V	I	L	S	H	E	H	L	D	H	R	G	G	L	D	S	I	L	H	I	W	P	M	L	W	I	R	S	.	.	.	.	.	.	.	.	.
Query Conservation																																										.																															.	.	.	.	.	.	.	.	.
Alig confidence							.													.	.	.	.																			.																															.	.	.	.	.	.	.	.	.
Template Conservation							.													.	.	.	.
Template Sequence		S	Y	F	I	D	.	D	E	C	P	T	V	I	D	S	V	K	Y	.	.	.	.	P	F	A	E	E	W	L	S	R	I	A	A	C	C	P	L	D	K	I	K	Y	V	V	M	N	H	A	E	G	D	H	A	S	S	L	K	D	H	Y	H	K	F	T	N	A	T	F	V	C	T	K	K	C	Q	E	H	L	K
Template Known Secondary structure							.	S	S	S									G	.	.	.	.	G	G												S		G	G	G							S								T	T					G	G	G		T	T
Template Predicted Secondary structure							.													.	.	.	.
Template SS confidence
		43	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
					581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	P	L	N	W	E	H	H	Q	P	C	V	R	G	E	A	W	Q	W	Q	G	L	R	F	S	A	H	W	P	L	Q	G	S	N	D	K	G	N	N	H	S	C	V	V	K	V	D	D	G	T	N	S	I	L	L	T	G	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																		.	.	.	.									.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.									.	.
Template Sequence		I	L	Y	G	M	E	K	A	T	W	L	I	V	D	D	K	Y	T	L	K	I	G	K	R	T	L	K	F	I	P	V	P	L	L	H	W	.	.	.	.	P	D	S	T	F	T	Y	C	.	.	P	E	D	K	I	L	F	S	N	D	G	F	G	Q	H	Y	A	T	S	R	R	W	A	D	E	C	D	V	S	H
Template Known Secondary structure							T	T								T	T						S	S									T	T	S	S	S	.	.	.	.	T	T							.	.	T	T	T	T						T	T	T							S			B	G	G	G	S
Template Predicted Secondary structure																																						.	.	.	.									.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.					.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
																	639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	P	A	E	Q	K	M	L	S	R	Y	W	Q	Q	V	Q	A	T	L	L	Q	V	P	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																													.
Template Sequence		V	M	H	L	F	K	E	Y	T	A	N	I	L	G	L	F	S	A	Q	M	R	K	A	L	E	V	A	.	S	T	V	E	I	K	Y	I	L	S	A	H
Template Known Secondary structure														T	T	T													.	T	T	S			S					S	S
Template Predicted Secondary structure																													.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions