Job Description P37443 Confidence 99.22% Date Thu Jan 5 11:55:38 GMT 2012 Rank 24 Aligned Residues 191 % Identity 19% Template c2az4A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ef2904; PDBTitle: crystal structure of a protein of unknown function from enterococcus2 faecalis v583 Resolution 2.00 Å

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		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.																									.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	A	M	V	I	A	R	N	G	K	A	I	L	Y	D	T	G	L	A	W	P	E	G	D	S	G	Q	Q	L	I	I	P	W	L	H	W	H	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	E	G	V	I	L	S	H	E	H	L	D	H	R	G
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	V	I	E	V	A	Y	K	D	A	H	I	F	F	D	F	G	T	E	F	R	P	E	L	D	L	P	D	D	H	I	E	T	L	I	N	N	R	L	V	P	E	L	K	D	L	Y	D	P	R	L	G	Y	E	Y	H	G	A	E	D	K	D	Y	Q	H	T	A	V	F	L	S	H	A	H	L	D	H	S	R
Template Known Secondary structure										T	T													T	T				S										T	T	S	S				S	S		B		G	G	G						S	S						S							S		S						T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.																										.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	D	S	I	L	H	I	W	P	M	L	W	I	R	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	W	E	H	H	Q	P	C	V	R	G	E	A	W	Q	W	Q	G	L	R	F	S	A	H	W	P	L	Q	G	S	N	D	K	G	N	N	H
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation												.	.	.																																																							.	.	.	.	.
Template Sequence		M	I	N	Y	L	D	P	A	V	P	.	.	.	L	Y	T	L	K	E	T	K	M	I	L	N	S	L	N	R	K	G	D	F	L	I	P	S	P	F	E	E	K	N	F	T	R	E	M	I	G	L	N	K	N	D	V	I	K	V	G	E	I	S	V	E	I	V	.	.	.	.	.	P	V	D	H	D	A	Y	G
Template Known Secondary structure		T	G	G	G	B		T	T	S		.	.	.															T	T	T	S		S	S				T	T	S		T	T										T	T						T	T							.	.	.	.	.					S	S	T	T
Template Predicted Secondary structure												.	.	.																																																							.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.
		620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.				.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.									.	.	.	.	.	.	.	.	670	.					.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.																								.	.	.	.	.	.	.	.											.	.	.	.								.	.	.	.	.	.
Query SS confidence																					.	.	.																								.	.	.	.	.	.	.	.											.	.	.	.								.	.	.	.	.	.
Query Sequence		S	C	V	V	K	V	D	D	G	T	N	S	I	L	L	T	G	D	I	.	.	.	E	A	P	A	E	Q	K	M	L	S	R	Y	W	Q	Q	V	Q	A	T	L	L	Q	V	.	.	.	.	.	.	.	.	P	H	H	G	S	N	T	S	S	S	.	.	.	.	L	P	L	I	Q	R	V	.	.	.	.	.	.
Query Conservation																					.	.	.																								.	.	.	.	.	.	.	.											.	.	.	.								.	.	.	.	.	.
Alig confidence																					.	.	.													.											.	.	.	.	.	.	.	.											.	.	.	.								.	.	.	.	.	.
Template Conservation																																				.
Template Sequence		A	S	A	L	L	I	R	T	P	D	H	F	I	T	Y	T	G	D	L	R	L	H	G	H	N	R	E	E	T	L	A	F	C	E	.	K	A	K	H	T	E	L	L	M	M	E	G	V	S	I	S	F	P	E	R	E	P	D	P	A	Q	I	A	V	V	S	E	E	D	L	V	Q	H	L	V	R	L	E	L	E
Template Known Secondary structure										T	T								S			S	S	S	T	T										.			T	T		S								G	G	G	S							T	T	B					S														T
Template Predicted Secondary structure																																				.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		679	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	K	V	A	L	A	S	A	S	R	Y	N	A	W	R	L	P	S	N	K	V	K	H	R	Y	Q	L	Q	G	Y	Q	W	I
Query Conservation
Alig confidence																.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		N	P	N	R	Q	I	T	F	N	G	Y	P	A	N	.	.	.	.	V	E	R	F	A	K	I	I	E	K	S	P	R	T	V	V
Template Known Secondary structure			S	S	S								T	T		.	.	.	.												S	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions