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Job DescriptionP37443
Confidence99.20%DateThu Jan 5 11:55:38 GMT 2012
Rank27Aligned Residues143
% Identity24%Templatec1vmeB_
PDB info PDB header:electron transportChain: B: PDB Molecule:flavoprotein; PDBTitle: crystal structure of flavoprotein (tm0755) from thermotoga maritima at2 1.80 a resolution
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   508. 510.........520.........530.........540....... ..550 .........560.........570... ......580.
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Query Sequence  QG. . . LAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHN. LEP. EGVILSHEHLDHRGGLDSILHIW. PMLWIRSP
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Template Sequence  EGISYNAYLVKLNGANVLIDGWKG. . . . . NYAKEFIDALSKIVDPKEITHIIVNHTEPDHSGSLPATLKTIGHDVEIIAS
Template Known Secondary structure  T
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G.....GGTTS
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   36...40.........50......... 60.........70.........80.........90.........100.........110
 
   582 .......590.........600.........610.........620.........630.........
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Query Sequence  L. . . . . . . . . . NWEHHQPCVRGEAWQWQGLRFSAHWPLQGSNDKGNNHSCVVKVDDGTNSILLTGDIE. . . . . . . . . . . .
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Template Sequence  NFGKRLLEGFYGIKDVTVVKDGEEREIGGKKFKFVXTPWLH. . . . WPDTXVTYLD. . . . GILFSCDVGGGYLLPEILDDS
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TT
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TTSS....STT
T....TTTT

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   111........120.........130.........140.........150. ........160. ........170.........180..
 
   640.........650.........660.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . APAEQKMLSRYWQQVQATLLQVPHHG
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Template Sequence  NESVVERYLPHVTKYIVTVIGHYKNYILEGAEKL. SSLKIKA. LLPGHG
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GGG.TTS

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   183......190.........200.........210...... ...220... ......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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