Job Description P37443 Confidence 99.20% Date Thu Jan 5 11:55:38 GMT 2012 Rank 27 Aligned Residues 143 % Identity 24% Template c1vmeB_ PDB info PDB header:electron transport Chain: B: PDB Molecule:flavoprotein; PDBTitle: crystal structure of flavoprotein (tm0755) from thermotoga maritima at2 1.80 a resolution Resolution 1.80 Å

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		508	.				510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.		.	.	550		.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.		.	.	.	.	.	.	580	.
Predicted Secondary structure				.	.	.																																							.				.																								.
Query SS confidence				.	.	.																																							.				.																								.
Query Sequence		Q	G	.	.	.	L	A	M	V	I	A	R	N	G	K	A	I	L	Y	D	T	G	L	A	W	P	E	G	D	S	G	Q	Q	L	I	I	P	W	L	H	W	H	N	.	L	E	P	.	E	G	V	I	L	S	H	E	H	L	D	H	R	G	G	L	D	S	I	L	H	I	W	.	P	M	L	W	I	R	S	P
Query Conservation				.	.	.																																							.				.																								.
Alig confidence				.	.	.																				.	.	.	.	.															.				.																								.
Template Conservation																										.	.	.	.	.
Template Sequence		E	G	I	S	Y	N	A	Y	L	V	K	L	N	G	A	N	V	L	I	D	G	W	K	G	.	.	.	.	.	N	Y	A	K	E	F	I	D	A	L	S	K	I	V	D	P	K	E	I	T	H	I	I	V	N	H	T	E	P	D	H	S	G	S	L	P	A	T	L	K	T	I	G	H	D	V	E	I	I	A	S
Template Known Secondary structure		T												T	T										G	.	.	.	.	.	G	G										T	T	S		G	G	G							S								T	T										S
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		582											.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	.	.	.	.	.	.	.	.	.	.	N	W	E	H	H	Q	P	C	V	R	G	E	A	W	Q	W	Q	G	L	R	F	S	A	H	W	P	L	Q	G	S	N	D	K	G	N	N	H	S	C	V	V	K	V	D	D	G	T	N	S	I	L	L	T	G	D	I	E	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation			.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.																															.	.	.	.											.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.											.	.	.	.
Template Sequence		N	F	G	K	R	L	L	E	G	F	Y	G	I	K	D	V	T	V	V	K	D	G	E	E	R	E	I	G	G	K	K	F	K	F	V	X	T	P	W	L	H	.	.	.	.	W	P	D	T	X	V	T	Y	L	D	.	.	.	.	G	I	L	F	S	C	D	V	G	G	G	Y	L	L	P	E	I	L	D	D	S
Template Known Secondary structure																						T	T						T	T									T	T	S	S	.	.	.	.	S	T	T							T	.	.	.	.	T						T	T	T			S	S			S	S	S	B	S
Template Predicted Secondary structure																																											.	.	.	.											.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
																									640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	A	E	Q	K	M	L	S	R	Y	W	Q	Q	V	Q	A	T	L	L	Q	V	P	H	H	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.								.
Template Conservation																																				.								.
Template Sequence		N	E	S	V	V	E	R	Y	L	P	H	V	T	K	Y	I	V	T	V	I	G	H	Y	K	N	Y	I	L	E	G	A	E	K	L	.	S	S	L	K	I	K	A	.	L	L	P	G	H	G
Template Known Secondary structure																						G	G	G												.	T	T	S			S		.				S	S	S
Template Predicted Secondary structure																																				.								.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.		.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions