Job Description P37443 Confidence 29.07% Date Thu Jan 5 11:55:38 GMT 2012 Rank 172 Aligned Residues 202 % Identity 13% Template c1oidA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein usha; PDBTitle: 5'-nucleotidase (e. coli) with an engineered disulfide2 bridge (s228c, p513c) Resolution 2.1 Å

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		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.					.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.		.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.			.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.																											.																					.	.
Query SS confidence																						.	.	.	.																											.																					.	.
Query Sequence		N	G	K	A	I	L	Y	D	T	G	L	A	W	P	E	G	D	S	G	Q	.	.	.	.	Q	L	I	I	P	W	L	H	W	H	N	L	E	P	E	G	V	I	L	S	H	E	H	L	D	H	.	R	G	G	L	D	S	I	L	H	I	W	P	M	L	W	I	R	S	P	L	.	.	N	W	E	H	H	Q	P
Query Conservation																						.	.	.	.																											.																					.	.
Alig confidence																						.	.	.	.													.	.													.																					.	.
Template Conservation																																						.	.
Template Sequence		G	G	S	V	L	L	L	S	G	G	D	I	N	T	G	V	P	E	S	D	L	Q	D	A	E	P	D	F	R	G	M	N	L	V	G	Y	.	.	D	A	M	A	I	G	N	H	E	F	D	N	P	L	T	V	L	R	Q	Q	E	K	W	A	K	F	P	L	L	S	A	N	I	Y	Q	K	S	T	G	E	R	L
Template Known Secondary structure		T									S			S	S	S						T	T	T	T											T		.	.							G	G	G	G	S	S													S	S					S	S				T	T	T			B	S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		C	V	R	G	E	A	W	Q	W	Q	G	L	R	F	S	A	H	W	P	L	Q	G	S	N	D	K	G	N	N	H	S	C	V	V	K	V	D	D	G	T	N	S	I	L	L	T	G	D	I	E	A	P	A	E	Q	K	M	L	S	R	Y	W	Q	Q	V	Q	A	T	L	L	Q	V	P	H	H	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.
Template Sequence		F	K	P	W	A	L	F	K	R	Q	D	L	K	I	A	V	I	G	L	T	T	D	D	T	A	K	I	G	N	P	E	Y	F	T	D	I	E	F	R	K	P	.	.	.	.	.	.	.	.	.	A	D	E	A	K	L	V	I	Q	E	L	Q	Q	T	E	K	P	D	I	I	I	A	A	T	H	M	G	H	Y	D
Template Known Secondary structure		S									T	T											T	T					S		G	G	G	G	T	T							.	.	.	.	.	.	.	.	.														T	T			S								S				G
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.										.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
						665	.	.	.	.	670	.	.	.	.	.	.	.	.	.		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700																		.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.					.	.
Predicted Secondary structure		.	.	.	.																.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence		.	.	.	.																.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		.	.	.	.	G	S	N	T	S	S	S	L	P	L	I	Q	R	V	N	.	G	K	V	A	L	A	S	A	S	R	Y	N	A	W	R	L	P	S	N	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	H	R	Y	Q	L	Q	G	Y	Q	W	I	D	T	P	H	.	.	.	.	Q	G
Query Conservation		.	.	.	.																.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Alig confidence		.	.	.	.																.										.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																															.	.	.	.	.	.
Template Sequence		N	G	E	H	G	C	N	A	P	G	D	V	E	M	A	R	A	L	P	A	G	S	L	A	M	I	V	G	G	.	.	.	.	.	.	H	S	Q	D	P	V	C	M	A	A	E	N	K	K	Q	V	D	Y	V	P	G	T	P	C	K	P	D	Q	Q	N	G	I	W	I	V	Q	A	H	E	W	G	K	Y	V	G
Template Known Secondary structure		G	G			T	T	S											S		T	T	S	S	S						.	.	.	.	.	.	S	S			B						T	T				S	S			T	T	S								T	T						B		S	T	T	S
Template Predicted Secondary structure																															.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.							.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	T	V	N	F	S	A	Q	G	W	R	I	S	S	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	D	F	E	F	R	N	G	E	M	K	M	V	N	Y	Q
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions