Job Description P37443 Confidence 99.13% Date Thu Jan 5 11:55:38 GMT 2012 Rank 34 Aligned Residues 192 % Identity 20% Template c1e5dA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:rubredoxin\:oxygen oxidoreductase; PDBTitle: rubredoxin oxygen:oxidoreductase (roo) from anaerobe2 desulfovibrio gigas Resolution 2.5 Å

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		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.			.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
Predicted Secondary structure																																						.	.																																			.	.	.	.	.	.	.	.
Query SS confidence																																						.	.																																			.	.	.	.	.	.	.	.
Query Sequence		A	M	V	I	A	R	N	G	K	A	I	L	Y	D	T	G	L	A	W	P	E	G	D	S	G	Q	Q	L	I	I	P	W	L	H	W	H	.	.	N	L	E	P	E	G	V	I	L	S	H	E	H	L	D	H	R	G	G	L	D	S	I	L	H	I	W	P	M	L	W	I	R	S	.	.	.	.	.	.	.	.
Query Conservation																																						.	.																																			.	.	.	.	.	.	.	.
Alig confidence						.														.	.	.	.	.														.	.																																			.	.	.	.	.	.	.	.
Template Conservation						.														.	.	.	.	.
Template Sequence		A	Y	L	V	.	E	D	E	K	T	T	L	F	D	T	V	K	A	.	.	.	.	.	E	Y	K	G	E	L	L	C	G	I	A	S	V	I	D	P	K	K	I	D	Y	L	V	I	Q	H	L	E	L	D	H	A	G	A	L	P	A	L	I	E	A	C	Q	P	E	K	I	F	T	S	S	L	G	Q	K	A	M
Template Known Secondary structure						.		S	S	S									G	.	.	.	.	.	G	G										T	T	S		G	G	G										S					T	T											S
Template Predicted Secondary structure						.														.	.	.	.	.
Template SS confidence
		37	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
						581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	P	L	N	W	E	H	H	Q	P	C	V	R	G	E	A	W	Q	W	Q	G	L	R	F	S	A	H	W	P	L	Q	G	S	N	D	K	G	N	N	H	S	C	V	V	K	V	D	D	G	T	N	S	I	L	L	T	G	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																				.	.	.	.							.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.							.	.
Template Sequence		E	S	H	F	H	Y	K	D	W	P	V	Q	V	V	K	H	G	E	T	L	S	L	G	K	R	T	V	T	F	Y	E	T	R	M	L	H	W	P	D	.	.	.	.	S	M	V	S	W	F	.	.	A	D	E	K	V	L	I	S	N	D	I	F	G	Q	N	I	A	A	S	E	R	F	S	D	Q	I	P	V	H
Template Known Secondary structure								S	S								T	T						S	S									T	T	S	S	S	T	T	.	.	.	.							.	.	T	T	T	T						T	T	T							S			B	G	G	G	S
Template Predicted Secondary structure																																									.	.	.	.							.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
																		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.		.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.												680	.	.	.	.	.	.	.	.	.	690
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	P	A	E	Q	K	M	L	S	R	Y	W	Q	Q	V	Q	A	T	L	.	L	Q	V	P	H	H	G	S	N	T	S	S	S	L	P	L	I	Q	R	V	N	.	.	.	.	.	.	.	.	.	.	.	G	K	V	A	L	A	S	A	S	R	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.								.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.
Template Sequence		T	L	E	R	A	M	R	E	Y	Y	A	N	I	V	N	P	Y	A	P	Q	T	L	K	A	I	E	T	L	.	V	G	A	G	V	A	P	E	F	I	C	P	D	H	G	V	I	F	R	G	A	D	Q	C	T	F	A	V	Q	K	Y	V	E	Y	A	E	Q	K	P	T	N	K	V	V	I	F	Y	D	S	M	W
Template Known Secondary structure															T	G	G	G												.			T	T				S					S	S	S		B			S																					S									S	S
Template Predicted Secondary structure																														.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		691	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	W	R	L	P	S	N	K	V	K	H	R	Y	Q	L	Q	G	Y	Q	W	I	D	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	S	T	E	K	M	A	R	V	L	A	E	S	F	R	D	E	G	C	T	V	K	L	M	W
Template Known Secondary structure		S																T	T
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions