Job Description P76473 Confidence 4.94% Date Thu Jan 5 12:23:18 GMT 2012 Rank 40 Aligned Residues 54 % Identity 13% Template c3imnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:heparin lyase i; PDBTitle: crystal structure of heparin lyase i from bacteroides2 thetaiotaomicron Resolution 1.81 Å

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		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	D	D	I	I	M	Y	R	Q	T	G	E	L	K	Y	G	L	N	Y	P	D	A	K	G	R	F	V	S	G	D	E	F	A	N	W	L	N	Q	H	R	Q	E	G	I	I	T	L	V	L	S	V	D	R	D	E	D	I	N	S	L	A	I	P	P	A	D	A
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		G	M	P	D	R	T	L	V	Q	T	P	.	.	.	.	.	.	.	.	.	.	Q	G	E	V	K	K	L	T	V	D	E	F	V	E	L	E	K	T	T	.	.	.	.	F	F	K	K	N	A	G	H	E	K	V	V	R	L	D	K	Q	G	N	P	M	K	D	K
Template Known Secondary structure						T	T					T	.	.	.	.	.	.	.	.	.	.	T	S																		.	.	.	.				T	T									B		T	T	S	S	B		B		T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.											.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions