Job Description P76473 Confidence 4.04% Date Thu Jan 5 12:23:18 GMT 2012 Rank 71 Aligned Residues 53 % Identity 13% Template c1u5tB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:defective in vacuolar protein sorting; vps36p; PDBTitle: structure of the escrt-ii endosomal trafficking complex Resolution 3.60 Å

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		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.			.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		F	V	S	G	D	E	F	A	N	W	L	N	Q	H	R	.	.	Q	E	G	I	I	T	L	V	L	S	V	D	R	D	E	D	I	N	S	L	A	I	P	P	A	D	A	I	D	R	Q	E	R	L	V	L	I	Q
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		I	I	T	L	V	D	L	Y	A	M	Y	N	K	S	M	R	I	G	T	G	L	I	S	P	M	E	M	R	E	A	C	E	R	F	E	H	L	G	L	N	E	L	K	L	V	K	V	N	K	R	I	L	C	V	T
Template Known Secondary structure					T	T									T	T	T	S	S	S													T	T	T	G	G	G	T			S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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