 |
Job Description | P76473 | Confidence | 3.68% | Date | Thu Jan 5 12:23:18 GMT 2012 |
Rank | 92 | Aligned Residues | 67 |
% Identity | 10% | Template | c1fftG_ |
PDB info |
PDB header:oxidoreductase | Chain: G: PDB Molecule:ubiquinol oxidase; |
PDBTitle: the structure of ubiquinol oxidase from escherichia coli
|
Resolution | 3.50 Å |
|
 |
  |   |
446 | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | |
|
|
. | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Q | P | S | R | Y | I | L | T | D | S | V | G | V | A | A | G | L | A | W | S | L | Q | R | D | D | I | I | M | Y | R | Q | T | G | E | L | K | Y | G | L | N | Y | P | D | A | K | G | R | F | V | . |
. |
. |
S | G | D | E | F | A | N | W | L | N | Q | H | R | Q | E | G | I | I | T |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |
|   |
|
|
|
|
|   |   |
|   |
|   |   |   |
|   |   |   | . |
|   |
|   |
|   |
|
|
|   |
| . |
|   |   |
|
|   |
|   |   |   |
|   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | P | R | L | G | S | Q | I | Y | A | M | A | G | M | Q | T | R | L | H | L | I | A | N | E | P | . |
G | T | Y | D | G | I | S | A | S | Y | S | . |
G | P | G | F | S | G | M | K | F | K | A | I | A | T | P | D | R | A | A | F | D | Q | W | V | A | K | A | K | Q | S | P | N | T | M |
Template Known Secondary structure |   |
 | G | G | G | T |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |
|
| S |
| . | B |
|
|  |  | B |
|
| S |
|
| . | S | T | T | T | T | T |
|
|  |  |
|
| B |
| S | S | T | T | T | T |  |  |  |  |  |  |  |  |  |
| S |
|
| B |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |
|
|
|
|
| . |
|
|
|  |  |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
. | . | . | . | . | . | . | . | . | 210 | . | |
. | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|