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Job DescriptionQ47689
Confidence97.29%DateThu Jan 5 12:37:03 GMT 2012
Rank6Aligned Residues435
% Identity14%Templated2a65a1
SCOP infoSNF-like SNF-like SNF-like
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50........ .60.........70.........80.........90
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Query Sequence  KTRHLIMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALV. . . . VWLVMQCLGELSVAMPETGAFHVYAARYLGPA
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Template Sequence  TRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGHG. TTPAIFYLLWRNR
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SSTTTTTTTT

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   10.........20.........30.........40.........50.........60.........70..... ....80........
 
   91........100.........110.........120... ......130..
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Query Sequence  TGYTVAWLYWLTWTVALGSSFTAAGFCMQYWFP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QVPVWVWCV
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Template Sequence  FAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPPTDPDSILRPFKEFLYSYIGVPKGDEPILKPSLFAYI
Template Known Secondary structure  TT








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   8990.........100.........110.........120.........130.........140.........150.........160........
 
   133......140.........150.........160.........170.........180.........190.........200.........210..
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Query Sequence  VFCAIIFGLNVISTRFFAEGEFWFSLVKVVTIIAFIILGGAAIFGFIPMQDGSPAPGLSNITAEGWFPHGGLPILMTMVA
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Template Sequence  VFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIAAVGQ
Template Known Secondary structure  TT
TTTTTT
TTS

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   171........180.........190.........200.........210.........220.........230.........240.........250
 
   213.... ..220.........230.........240....... ..250.........260.........270.........280.
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Query Sequence  VNFAF. SGTELIGIAAGETENPRKVIPVAIRTTIAR. . . . . . . . . . LIIFFIGTVFVLAALIPMQQVGVEKSPFVLVFEK
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Template Sequence  IFFTLSLGFGAIITYASYVRKDQDIVLSGLTAATLNEKAEVILGGSISIPAAVAFFGVANAVAIAKAGAFNLGFITLPAI
Template Known Secondary structure  TTTSSTTS
TTS

TT

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   251........260.........270.........280.........290.........300.........310.........320.........330
 
   282.......290.........300.........310.........320.........330.........340.........350.........360.
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Query Sequence  VGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNERTLPACFARVTKNGVPLTALSVSMLGGVLALFSSVVAPDTV
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Template Sequence  FSQTAGGTFLGFLWFFLLFFAGLTSSIAIMQPMIAFLEDEL. . . . . . . . . . KLSRKHAVLWTAAIVFFSAHLVMFLNKSL
Template Known Secondary structure  TTSTTTS..........


BTT
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   331........340.........350.........360.........370. ........380.........390.........400
 
   362.......370.........380..... ....390.........400.........410.........420.........
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Query Sequence  FVALSAISGFAVVAVWLSICASHF. . . . . . VFRRRHLQQGKALSELHYRAPWYPLVPVLGFVLCLVACVGLAFD. . . . . .
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Template Sequence  DEMDFWAGTIGVVFFGLTELIIFFWIFGADKAWEEINRGGIIKVPRIYYYVMRYITPAFLAVLLVVWAREYIPKIMEETH
Template Known Secondary structure  TTTTTS
TT
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   401........410.........420.........430.........440.........450.........460.........470.........480
 
   430.........440.........450.........460
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Query Sequence  PAQRIALWCGLPFVALCYGAYFLTQPRNAKQ
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Template Sequence  WTVWITRFYIIGLFLFLTFLVFLAERRRNHE
Template Known Secondary structure  TT
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   481........490.........500.........510.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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