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Job DescriptionQ47689
Confidence99.22%DateThu Jan 5 12:37:03 GMT 2012
Rank5Aligned Residues436
% Identity10%Templatec3dh4A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: crystal structure of sodium/sugar symporter with bound galactose from2 vibrio parahaemolyticus
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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Query Sequence  RTMKTRHLIMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVWLVMQCLGELSVAMPETGAFHVYAARYLG. PA
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Template Sequence  KSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASY. EWMSAITLIIVGKYFLPIFIEKGIY. TIPEFVEKRFNKKL
Template Known Secondary structure  S



STT
GGG.TTT

.ST
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   4950.........60.........70.........80....... ..90.........100.........110.. .......120......
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  TGYTVAWLYWLTWTVALGSSFTAAGFCMQYWFPQVPVWVWCVVFCAIIFGLNVISTRFFAEGEFWFSLVKVVTIIAFIIL
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Template Sequence  KTILAVFWISLYIFVNLTSVLYLGGLALETILGIPLMYSILGLALFALVYSIVVWTDVIQVFFLVLGGFMTTYMAVSFIG
Template Known Secondary structure  TTT

TT


S
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   127..130.........140.........150.........160.........170.........180.........190.........200......
 
   171 ........180.........190.........200.........210.........220.........230.........240......
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Query Sequence  G. . . . GAAIFGFIPMQDGSPAPGLSNITAEGWFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPRKVIPVAIRTTIA
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Template Sequence  GTDGWFAGVSKMVDAAPGHFEMILDQSNPQYMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAF
Template Known Secondary structure  TTS

GGGG
SS

SSSSGGGGS
TTSTTTTT
SSS
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   213......220.........230.........240.........250.........260.........270.........280.........290..
 
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Query Sequence  RLIIFFIGTVFVLAAL. . . . . . . . . . . . . . . . . IPMQQVGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYA
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Template Sequence  LKLIVPFLVVLPGIAAYVITSDPQLMASLGDIAATNLPSAANADKAYPWLTQFLPVGVKGVVFAALAAAIVSSLASMLNS
Template Known Secondary structure  GGGTT

TT

S



SSSGGGTT

TT
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   293......300.........310.........320.........330.........340.........350.........360.........370..
 
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Query Sequence  SGRMLWSLSNERTLPACFARVTKNGVPLTALSVSMLGGVLALFSSV. VAPDTVFVALSAISGFAVVAVWLSICASHFVFR
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Template Sequence  TATIF. . . TMDIYKEYISPDSGDHKLVNVGRTAAVVALIIACLIAPMLGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWK
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S
S
SSGGGGGG
S
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T
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   373.... ..380.........390.........400.........410.........420.........430.........440.........
 
   389390.........400.........410.........420.........430.........440.........450.........460.....
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Query Sequence  RRHLQQGKALSELHYRAPWYPLVPVLGFVLCLVACVGLAFDPAQRIALWCGLPFVALCYGAYFLTQPRNAKQEPEHV
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Template Sequence  KTTSK. . . . . . . . . . . . . GAIIGVVASIPFALFLKFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDPKGISV
Template Known Secondary structure  T

.............TSSS


TT
SSSS
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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