Job Description P36881 Confidence 99.49% Date Thu Jan 5 11:53:56 GMT 2012 Rank 8 Aligned Residues 124 % Identity 14% Template c3gdwA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sigma-54 interaction domain protein; PDBTitle: crystal structure of sigma-54 interaction domain protein from2 enterococcus faecalis Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																																											.	.
Query SS confidence											.																																											.	.
Query Sequence		L	G	W	V	I	T	C	H	D	.	D	R	A	Q	E	I	L	D	A	L	E	K	K	H	G	A	L	L	Q	C	R	A	V	N	F	W	R	G	L	S	S	N	M	L	S	R	M	M	C	D	A	L	.	.	H	E	A	D	S	G	E	G	V	I	F	L	T	D	I	A	G	A	P	P	Y	R	V	A	S	L
Query Conservation											.																																											.	.
Alig confidence											.																	.																										.	.																.	.
Template Conservation																												.																																											.	.
Template Sequence		V	G	V	F	V	L	X	H	G	D	S	T	A	S	S	X	L	K	T	A	Q	E	L	L	G	T	.	S	I	G	T	A	X	N	X	P	L	T	X	E	V	Q	T	X	Y	E	Q	L	R	N	Q	V	I	T	Q	K	E	S	L	N	N	G	I	L	L	L	T	D	X	.	.	G	S	L	N	S	F	G	N	X
Template Known Secondary structure										S	S	S														T		.										T	T	S															T	S	T	G	G	G	T	T								S	.	.	G	G	G	G	G
Template Predicted Secondary structure																												.																																											.	.
Template SS confidence
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570		.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.			.	.	.	.	.	.	.	620	.
		79	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.
Predicted Secondary structure						.																						.																							.
Query SS confidence						.																						.																							.
Query Sequence		L	S	H	K	.	H	S	R	C	E	V	I	S	G	V	T	L	P	L	I	E	Q	M	M	A	C	.	R	E	T	M	T	S	S	E	F	R	E	R	I	V	E	L	G	A	P	E	V	S	.	S	L	W
Query Conservation						.																						.																							.
Alig confidence						.																						.																							.
Template Conservation
Template Sequence		L	F	E	E	T	G	I	R	T	K	A	I	T	X	T	S	T	X	I	V	L	E	A	I	R	X	A	S	V	G	R	S	L	E	D	I	Y	Q	N	I	Q	L	S	F	E	S	V	V	R	E	Q	F	R
Template Known Secondary structure															S															T	T																						T
Template Predicted Secondary structure
Template SS confidence
		622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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