Job Description P36881 Confidence 20.60% Date Thu Jan 5 11:53:56 GMT 2012 Rank 44 Aligned Residues 82 % Identity 12% Template c2hqbA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional activator of comk gene; PDBTitle: crystal structure of a transcriptional activator of comk2 gene from bacillus halodurans Resolution 2.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	G	W	V	I	T	C	H	D	D	R	A	Q	E	I	L	D	A	L	E	K	K	H	G	A	L	L	Q	C	R	A	V	N	F	W	R	G	L	S	S	N	M	L	S	R	M	M	C	D	A	L	H	E	A	D	S	G	E	G	V	I	F	L	T	D	I	A	G	A	P	P	Y	R	V	A	S	L	L	S
Query Conservation
Alig confidence												.														.																														.	.									.	.	.	.
Template Conservation												.														.																														.	.									.	.	.	.
Template Sequence		X	V	G	L	L	V	E	D	T	G	.	W	N	R	K	A	Y	E	G	L	L	N	I	H	.	S	N	L	D	V	D	V	V	L	E	E	G	V	N	S	E	Q	K	A	H	R	R	I	K	E	L	V	D	G	.	.	G	V	N	L	I	F	G	H	.	.	.	.	G	H	A	F	A	E	Y	F	S	T	I	H
Template Known Secondary structure												.		T												.			S												S														T	.	.	T								.	.	.	.	S	T								T	T	T
Template Predicted Secondary structure												.														.																														.	.									.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.
		81	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	H	S	R	C	E	V	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	Y	P	D	V	H	F	V	S
Template Known Secondary structure		T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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