Job Description P36881 Confidence 21.67% Date Thu Jan 5 11:53:56 GMT 2012 Rank 43 Aligned Residues 79 % Identity 19% Template c2dt8A_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:degv family protein; PDBTitle: fatty acid binding of a degv family protein from thermus thermophilus Resolution 1.48 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.
Predicted Secondary structure																																				.												.																					.	.	.	.	.	.
Query SS confidence																																				.												.																					.	.	.	.	.	.
Query Sequence		S	S	N	M	L	S	R	M	M	C	D	A	L	H	E	A	D	S	G	E	G	V	I	F	L	T	D	I	A	G	A	P	P	Y	.	R	V	A	S	L	L	S	H	K	H	S	.	R	C	E	V	I	S	G	V	T	L	P	L	I	E	Q	M	M	A	C	R	.	.	.	.	.	.	E	T	M	T	S	S	E
Query Conservation																																				.												.																					.	.	.	.	.	.
Alig confidence																	.	.	.																	.												.																					.	.	.	.	.	.
Template Conservation																	.	.	.
Template Sequence		S	P	E	D	F	A	R	V	Y	R	E	A	L	E	E	.	.	.	A	D	H	V	L	S	L	H	I	S	G	K	L	S	G	T	V	Q	S	A	E	L	A	A	Q	E	F	P	G	R	V	T	V	V	D	T	Q	A	A	S	L	G	V	G	X	X	V	L	R	A	K	E	L	L	E	E	G	Q	S	L	E	A
Template Known Secondary structure														T	T	S	.	.	.		S							S		T	T	T		T										T	T	S	T	T	S							S			T																	T
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		112	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	E	R	I	V	E	L	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	A	E	L	E	R	L	R	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions