Phyre 2 alignment of P45548 with d2r8ca2

Job Description P45548
Confidence 99.41% Date Thu Jan 5 12:03:05 GMT 2012

Rank 52 Aligned Residues 262

% Identity 13% Template d2r8ca2

SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Zn-dependent arginine carboxypeptidase-like

Resolution 2.31

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence	G	Y	T	L	A	H	E	H	L	H	I	D	L	S	G	F	K	N	N	V	.	D	C	R	L	D	Q	Y	A	F	I	C	Q	E	M	N	D	L	M	T	R	G	V	R	N	V	I	E	M	T	N	R	Y	M	G	R	N	A	Q	F	M	L	D	V	M	R	E	T	G	I	N	V	V	A	C	T	G	Y	Y	Q
Query Conservation																					.
Alig confidence																					.																													.	.
Template Conservation																																																		.	.
Template Sequence	G	L	I	D	L	H	V	H	V	V	A	I	E	F	N	L	P	R	V	A	T	L	P	N	V	L	V	T	L	R	A	V	P	I	M	R	A	M	L	R	R	G	F	T	T	V	R	D	A	.	.	G	G	A	G	Y	P	F	K	Q	A	V	E	S	G	L	V	E	G	P	R	L	F	V	S	G	R	A	L	S
Template Known Secondary structure									T	T			S	S								S																			T	T								.	.	S	S											T	T	S	S										S
Template Predicted Secondary structure																																																		.	.
Template SS confidence
	58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

	86	.	.	.	90	.	.	.	.	.																									.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	D	A	F	F	P	E	H	V	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	V	Q	E	L	A	Q	E	M	V	D	E	I	E	Q	G	I	D	G	T	E	L	K	A	G	I	I	A	E	I	G	T	S	E	G	K	I	T	P	L	E	E	K	V	F
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	Q	T	G	G	H	A	D	P	R	A	R	S	D	Y	M	P	P	D	S	P	C	G	C	C	V	R	V	G	A	L	G	R	V	A	D	G	V	D	E	V	R	R	A	V	R	E	E	L	Q	M	G	A	D	Q	I	K	I	M	A	S	G	G	V	A	S	P	T	D	P	V	G	V	F	G	Y	S	E	D	E	I
Template Known Secondary structure		T	T	S	T	T						S	S	S				S		S	S	S	S	S			T	T								S															T		S	S						B			S	S	S	S	S			S	S		B		S
Template Predicted Secondary structure
Template SS confidence
	136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

	142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.
Query Sequence	I	A	A	A	L	A	H	N	Q	T	G	R	P	I	S	T	H	T	S	F	S	T	M	G	L	E	Q	L	A	L	L	Q	A	H	G	V	D	L	S	R	V	T	V	G	H	C	D	L	K	D	N	L	D	N	I	L	K	M	I	D	L	G	A	Y	V	Q	F	D	T	I	G	K	N	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.
Template Sequence	R	A	I	V	A	E	A	Q	G	R	G	T	Y	V	L	A	H	A	Y	T	P	A	A	I	A	R	A	V	R	.	.	.	.	.	.	.	.	C	G	V	R	T	I	E	H	G	N	L	I	D	D	E	T	A	R	L	V	A	E	H	G	A	Y	V	V	P	T	L	V	T	Y	D	A	L	A	S	E	G	E	K
Template Known Secondary structure										T	T									S										.	.	.	.	.	.	.	.	T	T		S						T	T												T	T							T										T	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.
Template SS confidence
	216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.									.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

											215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	.	S	Y	Y	P	D	E	K	R	I	A	M	L	H	A	L	R	D	R	G	L	L	N	R	V	M	L	S	M	D	I	T	R	R	S	H	L	K	A	N	G	G	Y	G	Y	D	Y	L	L	T	T	F	I	P	Q	L	R	Q	S	G	F	S	Q	A	D	V	D	V	M	L	R
Query Conservation	.	.	.	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.																					.	.										.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																															.	.										.	.	.	.	.	.	.	.	.	.																	.
Template Sequence	Y	G	L	P	P	E	S	I	A	K	I	A	D	V	H	G	A	G	L	H	S	I	E	I	M	K	R	A	G	V	.	.	K	M	G	F	G	T	D	L	L	.	.	.	.	.	.	.	.	.	.	G	E	A	Q	R	L	Q	S	D	E	F	R	I	L	A	E	.	V	L	S	P	A	E	V	I	A	S	A	T
Template Known Secondary structure	T	T							T	T	S	T	T	T	G	G	G											T	T		.	.										.	.	.	.	.	.	.	.	.	.	G	G	G	G	G	G	T	T							T	T	.	T	S									T	T
Template Predicted Secondary structure																															.	.										.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
	288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.											.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.

	285	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	N	P	S	Q	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence	I	V	S	A	E	V	L
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
	355	.	.	.	.	360	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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