Phyre 2 alignment of P45548 with d2ooda2

Job Description P45548
Confidence 99.12% Date Thu Jan 5 12:03:05 GMT 2012

Rank 68 Aligned Residues 273

% Identity 12% Template d2ooda2

SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases SAH/MTA deaminase-like

Resolution 2.62

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.																		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	G	Y	T	L	A	H	E	H	L	H	I	D	L	S	G	F	K	N	N	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	R	L	D	Q	Y	A	F	I	C	Q	E	M	N	D	L	M	T	R	G	V	R	N	V	I	E	M	T	N	R	Y	M	G	R	N	A	Q	F	M	L	D	V
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation																																																																								.
Template Sequence	G	F	I	D	G	H	I	H	L	P	Q	T	R	V	L	G	A	Y	G	E	Q	L	L	P	W	L	Q	K	S	I	Y	P	E	E	I	K	Y	K	D	R	N	Y	A	R	E	G	V	K	R	F	L	D	A	L	L	A	A	G	T	T	T	C	Q	A	F	T	S	S	S	P	V	.	A	T	E	E	L	F	E	E
Template Known Secondary structure									G	G	G	T	T		T	T			S											T					G	G	G	G	S																		T	T										S	S			.
Template Predicted Secondary structure																																																																								.
Template SS confidence
	74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.

	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	M	R	E	T	G	I	N	V	V	A	C	T	G	Y	Y	Q	D	A	F	F	P	E	H	V	A	T	R	S	V	Q	E	L	A	Q	E	M	V	D	E	I	E	Q	G	I	D	G	T	E	L	K	A	G	I	I	A	E	I	G	T	S	E	G	K	I	T	P	L	E	E	K	V	F	I	A	A	A	L	A	H	N
Query Conservation
Alig confidence																				.	.																																							.	.	.	.	.	.
Template Conservation																				.	.																																							.	.	.	.	.	.
Template Sequence	A	S	R	R	N	X	R	V	I	A	G	L	T	G	I	D	R	N	A	.	.	P	A	E	F	I	D	T	P	E	N	F	Y	R	D	S	K	R	L	I	A	Q	Y	H	D	K	G	R	N	L	Y	A	I	T	P	R	F	A	F	.	.	.	.	.	.	G	A	S	P	E	L	L	K	A	C	Q	R	L	K	H
Template Known Secondary structure					T												S	S	S	.	.		T	T	T																			T	T	B	T	T									B	G	G	.	.	.	.	.	.	G
Template Predicted Secondary structure																				.	.																																							.	.	.	.	.	.
Template SS confidence
	153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

	150	.		.	.	.	.	.	.	.	.	160	.	.	.												.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure			.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence	Q	T	.	G	R	P	I	S	T	H	T	S	F	S	T	.	.	.	.	.	.	.	.	.	.	.	M	G	L	E	Q	L	A	L	L	Q	A	H	G	V	D	L	S	R	V	T	V	G	H	C	D	L	K	D	N	L	D	N	I	L	K	M	I	D	L	G	A	Y	V	Q	F	D	T	I	G	K	N	S	Y	Y
Query Conservation			.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.													.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																																			.
Template Sequence	E	H	P	D	C	W	V	N	T	H	I	S	E	N	P	A	E	C	S	G	V	L	V	E	H	P	D	C	Q	D	Y	L	G	V	Y	E	K	F	D	L	V	G	P	K	F	S	G	G	H	G	.	V	Y	L	S	N	N	E	F	R	R	X	S	K	K	G	A	A	V	V	F	C	P	C	S	N	L	F	L	G
Template Known Secondary structure			T	T	S							S														T	T		S	S							T	T	T			S	T	T							.	T	T													T													T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
	225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

	218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.																.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	P	D	E	K	R	I	A	M	L	H	A	L	R	D	R	G	L	L	N	R	V	M	L	S	M	D	I	T	R	R	S	H	L	K	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	Y	G	Y	D	Y	L	L	T	T	F	I	P	Q	L	R	Q	S	G	F	S	Q	A	D	V	D	V	M
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.
Template Sequence	S	G	L	F	R	.	.	.	L	G	R	A	T	D	P	E	H	R	V	K	X	S	F	G	T	D	V	G	G	G	N	R	F	S	X	I	S	V	L	D	D	A	Y	K	V	G	X	C	N	N	T	L	L	D	G	S	I	D	P	S	R	K	D	L	A	E	A	E	R	N	K	L	S	P	Y	R	G	F	W	S
Template Known Secondary structure						.	.	.					T		T	T	S										B	T	T	B	S																						S	S	S	S	S		G	G	G									T
Template Predicted Secondary structure						.	.	.
Template SS confidence
	304	.	.	.	.				.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

	283	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	R	E	N	P	S	Q	F	F	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence	V	T	L	G	G	A	E	G	L	Y
Template Known Secondary structure	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
	381	.	.	.	.	.	.	.	.	390

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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