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Job DescriptionP45548
Confidence99.29%DateThu Jan 5 12:03:05 GMT 2012
Rank60Aligned Residues257
% Identity14%Templated2imra2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases DR0824-like
Resolution1.78

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10....... ..20.........30.........40.........50.........60.........70.....
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Query Sequence  GYTLAHEHLHI. . . . . . . . . . . DLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGI
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Template Sequence  PPVNAHTHLDMSAYEFQALPYFQWIPEVVIRGRHLRGVAAAQAGADTLTRLGAGGVGDI. . . . . VWAPEVMDALLAREDL
Template Known Secondary structure 


SS


TSTT

TT


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ST
TT
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   92.......100.........110.........120.........130.........140.........150 .........160......
 
   76...80.........90.........100.........110.........120.........130.........140.........150.....
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Query Sequence  NVVACTGYYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPI
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Template Sequence  SGTLYFEVLNP. . . . . . . FPDKADEVFAAARTHLERWRRLERPGLRLGLSPHTPFTVS. . . . HRLMRLLSDYAAGEGLPL
Template Known Secondary structure 

B
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GGGTT
BTT

SSSB
....T

B
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   167..170....... ..180.........190.........200.........210....... ..220.........230.....
 
   156...160......... 170.........180.........190.........200.
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Query Sequence  STHTSFSTMGLEQL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ALLQAHGVDLSRVTVGHCDLKDNLDNILKMID
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Template Conservation    
                                                                             
Template Sequence  QIHVAEHPTELEMFRTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPTLVHMVNVTPDDIARVAR
Template Known Secondary structure  S
SS
STTGGGS
GGGS
SSTS


TT

T
GGG



S

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   236...240.........250.........260.........270.........280.........290.........300.........310.....
 
   202.......210.........220.........230.........240.........250.........260.........270.........280.
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Query Sequence  LGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQADVDV
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Template Sequence  AGCAVVTCPRSNHHLECGTFD. . . WPAFAAAGV. . EVALGTDSVASG. . . . . . . ETLNVREEVTFARQLYPGLDPRVLVR
Template Known Secondary structure  T


TT




...TT
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.......S
S
T
TTS
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   316...320.........330...... ...340..... ....350....... ..360.........370.........380...
 
   282.......290.
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Query Sequence  MLRENPSQFF
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Template Sequence  AAVKGGQRVV
Template Known Secondary structure 
Template Predicted Secondary structure 
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   384.....390...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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