Job Description P45548 Confidence 98.19% Date Thu Jan 5 12:03:05 GMT 2012 Rank 124 Aligned Residues 254 % Identity 13% Template d1yrra2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain Resolution 2.00

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.							.	.	.	.	.	.	80
Predicted Secondary structure																																																																					.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.
Query Sequence		G	Y	T	L	A	H	E	H	L	H	I	D	L	S	G	F	K	N	N	V	D	C	R	L	D	Q	Y	A	F	I	C	Q	E	M	N	D	L	M	T	R	G	V	R	N	V	I	E	M	T	N	R	Y	M	G	R	N	A	Q	F	M	L	D	V	M	R	E	T	.	.	.	.	.	.	G	I	N	V	V	A	C
Query Conservation																																																																					.	.	.	.	.	.
Alig confidence										.	.	.																																																									.	.	.	.	.	.
Template Conservation										.	.	.
Template Sequence		G	F	I	D	V	Q	L	N	.	.	.	G	C	G	G	V	Q	F	N	D	T	A	E	A	V	S	V	E	T	L	E	I	M	Q	K	A	N	E	K	S	G	C	T	N	Y	L	P	T	L	I	T	T	S	D	E	L	M	K	Q	G	V	R	V	M	R	E	Y	L	A	K	H	P	N	Q	A	L	G	L	H	L
Template Known Secondary structure									S	.	.	.			T	T			S	S	S	S	T	T	T	S	S														T	T																															T	T	S	B
Template Predicted Secondary structure										.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	Y	Y	Q	D	A	F	F	P	E	H	V	A	T	R	S	V	Q	E	L	A	Q	E	M	V	D	E	I	E	Q	G	I	D	G	T	E	L	K	A	G	I	I	A	E	I	G	T	S	E	G	K	I	T	P	L	E	E	K	V	F	I	A	A	A	L	A	H	N	Q	T	G	R	P	I	S	T	H	T	S
Query Conservation
Alig confidence												.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	P	W	L	N	L	V	K	K	.	T	H	N	P	N	F	V	R	K	P	D	A	A	L	V	D	F	L	C	E	N	A	D	V	I	T	K	V	T	L	A	P	E	M	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	V	I	S	K	L	A	N	A	G	I	V	V	S	A	G	H	S
Template Known Secondary structure				S	S				S			.				S		S															T	T	T	T								G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T							S
Template Predicted Secondary structure												.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.															.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.
Query Sequence		F	S	T	M	G	L	E	Q	L	A	L	L	Q	A	H	G	V	D	L	S	R	V	T	V	G	H	C	D	L	K	.	.	.	.	.	.	.	D	N	L	D	N	I	L	K	M	I	D	L	G	A	Y	V	Q	F	D	T	I	G	K	N	S	Y	Y	P	D	E	K	R	I	A	M	L	H	A	L	R	D	R	G
Query Conservation																																.	.	.	.	.	.	.
Alig confidence						.	.													.	.	.	.									.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation						.	.													.	.	.	.																																											.	.	.	.	.	.
Template Sequence		N	A	T	L	.	.	K	E	A	K	A	G	F	R	A	G	I	T	.	.	.	.	F	A	T	H	L	Y	N	A	M	P	Y	I	T	G	R	E	P	G	L	A	G	A	I	L	D	E	A	D	I	Y	C	G	I	I	A	D	G	L	H	V	D	Y	.	.	.	.	.	.	A	N	I	R	N	A	K	R	L	K
Template Known Secondary structure						.	.										T			.	.	.	.			S	S	T	T	T	T	S					S	S												T	T								S	S	S	S	S			.	.	.	.	.	.
Template Predicted Secondary structure						.	.													.	.	.	.																																											.	.	.	.	.	.
Template SS confidence
		197	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.							.	.	.	.	.	260	.	.	.	.
		234	.	.	.	.	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.																				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure												.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	N	R	V	M	L	S	M	D	.	.	.	I	T	R	R	S	H	L	K	A	N	G	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	D	Y	L	L	T	T	F	I	P	Q	L	R	Q	S	G	F	S	Q	A	D	V	D	V	M	L	R	E	N	P	S	Q	F	F
Query Conservation												.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.									.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.
Template Sequence		G	.	D	K	L	C	L	V	T	D	A	T	A	P	A	G	A	N	I	E	Q	F	I	F	A	G	K	T	I	Y	Y	R	N	G	L	C	V	D	E	N	G	T	L	S	G	S	S	L	T	M	I	E	G	V	R	N	L	V	E	H	C	G	I	A	L	D	E	V	L	R	M	A	T	L	Y	P	A	R	A	I
Template Known Secondary structure		G	.	G	G							B		T	T	T	T	S			S					T	T							S	S					T	T						B																											T							T
Template Predicted Secondary structure			.
Template SS confidence
		265		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions